Gene
| Gene Model ID | pfu_aug1.0_39332.1_62991 |
|---|---|
| Locus | scaffold39332.1 : 240 ... 5718 : - |
| To GenomeBrowser | scaffold39332.1:240..5718 |
| Genes list of scaffold | scaffold39332.1 |
| Synonym | pfu_aug2.0_1437.1_24921 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_39332.1_62991.t1 | 2 | 1 | Pro_dh | 11 | 88 | 4.1e-28 | 98.2 | 8.6e-22 | 1.3e-17 | 63.8 |
| pfu_aug1.0_39332.1_62991.t1 | 2 | 2 | Pro_dh | 91 | 130 | 4.1e-28 | 98.2 | 1.9e-12 | 2.8e-08 | 33.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_39332.1_62991.t1 | gi|327281172|ref|XP_003225323.1| | PREDICTED: probable proline dehydrogenase 2 isoform X2 [Anolis carolinensis] | 1.0e-28 |
Transcript
| Transcript ID | pfu_aug1.0_39332.1_62991.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_39332.1_62991.t1 gctacccacggtctgttatgccgagacgttgactttatcttggccaatggggtatgtttcggtagcaagctcgtcagagg ggcatacatggacaaagagaggaagctcgccggtatccaaggttacccagatcctgtatgtgacacgtttgaagacacaa ctgataattacaacaagtccatggataccatgctacgtcacatagcaacgggaaatggtcgcgttgcaaccgttatcgca tctcacaacgaagacacagttcacacaggtcagagtaattacaaagtatacaagtccattccatacggtattccagagga cacactgccgtatctttcccgccgtgtgacggagaatagggcggtactggatggtgcaaggcgtgagcgtatcctgctga aggcaacgctcaaagaacgacttgtaggacggaaacagtcaatagagaattga |
|
Protein
| Protein ID | pfu_aug1.0_39332.1_62991.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_39332.1_62991.t1 ATHGLLCRDVDFILANGVCFGSKLVRGAYMDKERKLAGIQGYPDPVCDTFEDTTDNYNKSMDTMLRHIATGNGRVATVIA SHNEDTVHTGQSNYKVYKSIPYGIPEDTLPYLSRRVTENRAVLDGARRERILLKATLKERLVGRKQSIEN |
|