Gene
| Gene Model ID | pfu_aug1.0_3935.1_01579 |
|---|---|
| Locus | scaffold3935.1 : 29676 ... 31853 : + |
| To GenomeBrowser | scaffold3935.1:29676..31853 |
| Genes list of scaffold | scaffold3935.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3935.1_01579.t1 | 1 | 1 | BEN | 152 | 231 | 1.9e-07 | 31.0 | 9.4e-11 | 3.5e-07 | 30.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3935.1_01579.t1 | gi|126310385|ref|XP_001368191.1| | PREDICTED: BEN domain-containing protein 3 isoform X1 [Monodelphis domestica] | 4.0e-13 |
Transcript
| Transcript ID | pfu_aug1.0_3935.1_01579.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3935.1_01579.t1 atgtccaacgctataacgtcagtaagttcagctacgagtaccaacgcaatcgtgacatcgacacccgtacgacctagagc tcggttgtcgtccgacacgacatttacgttccaatcgatacgacctgagcaacaacatacgagcctccagtccataaata gtgcactaggaataataattagatcgattgacacaaacaccggcaagctggataagaaactggaccaagtgatcggccgt ctggacactttaagtaagagacagtttgagcttgaaaaatctgttcgatccttacaggcctcccaagatgtgctcgcggc cggtgttagtcaatccgttcgtcccgcgcctcagaactctatagatgacggagatctagacagtgtgccgagtgagtttc gaatctctatcgaggagctccgtgacatttataagtgcacaaacggggccgggaatatggctagtcatctggtgaagaga ctatttccagaattgtttgggccggcacaattacggttccagtataattggtacggcaacgggaaactcaagaaggaacc attggattcaactcgcaagaccgtcgtcgagacttacgtgtctcacttctatccggaagtgcgttccgccgattcttgga aggagagggtggtgcccaagattaatgaacttttaaggcgtagcgataagaaggccatcgccatgccagagcgctctcct acttgtcatgattccttctccttcctaggatacttaaacaacgtctaa |
|
Protein
| Protein ID | pfu_aug1.0_3935.1_01579.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3935.1_01579.t1 MSNAITSVSSATSTNAIVTSTPVRPRARLSSDTTFTFQSIRPEQQHTSLQSINSALGIIIRSIDTNTGKLDKKLDQVIGR LDTLSKRQFELEKSVRSLQASQDVLAAGVSQSVRPAPQNSIDDGDLDSVPSEFRISIEELRDIYKCTNGAGNMASHLVKR LFPELFGPAQLRFQYNWYGNGKLKKEPLDSTRKTVVETYVSHFYPEVRSADSWKERVVPKINELLRRSDKKAIAMPERSP TCHDSFSFLGYLNNV |
|