Gene
| Gene Model ID | pfu_aug1.0_3935.1_01580 |
|---|---|
| Locus | scaffold3935.1 : 39901 ... 48425 : - |
| To GenomeBrowser | scaffold3935.1:39901..48425 |
| Genes list of scaffold | scaffold3935.1 |
| Synonym | pfu_aug2.0_7971.1_06324 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3935.1_01580.t1 | 2 | 1 | MOSC_N | 2 | 73 | 2.5e-07 | 30.4 | 6.0e-10 | 3.0e-06 | 26.9 |
| pfu_aug1.0_3935.1_01580.t1 | 1 | 1 | MOSC | 100 | 240 | 1.1e-22 | 79.9 | 3.5e-26 | 1.7e-22 | 79.2 |
| pfu_aug1.0_3935.1_01580.t1 | 2 | 2 | MOSC_N | 106 | 133 | 2.5e-07 | 30.4 | 0.058 | 290.0 | 1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3935.1_01580.t1 | gi|115669865|ref|XP_001202774.1| | 1.99965e-42 |
Transcript
| Transcript ID | pfu_aug1.0_3935.1_01580.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3935.1_01580.t1 atgatcaaacccaaactagatctcatgtctcacatgctcacactgacttacaaagatatggagcggttgacccttccctt agatgtagatatcaccggtgatgtacggagaaatgacagcacagcagtctgtagtagtaaagtatgtggggacaggatcc agggtatagactgtggagaagaagcagcggagtggctcagtcaagctcttcagagacctggatgtcgactaattcaacaa gacacagctagtcatcgtaaaacaaaactcgccgactctggtgtcaacaccaaagattctgtacatcaaagtatctcatt ggctaatgaatctcagtatctattggttaccagatcaagtatggaaaaattgaagcagaaaatacaagagggaacctgta acggacagcaaggtcaggaagatgttgaactggagaatttgatcaaccgtttccgtggtaacctagtcataggtggagga tgccccctagaggaggactcctggagtgagatacaaataggagcacacaattttatgagtcagggaggatgtagtcgatg tcagatgatctgtttagaccaggagaatggtactaggagtaaagaacctctccgtacactggccgtatggaggggaagaa aggttacgttcggaatccatataaggaataaagaatacatcaaggggacattactgcgtatcggggaccctgtacatgta ataagaactagcagtgaacaataa |
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Protein
| Protein ID | pfu_aug1.0_3935.1_01580.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3935.1_01580.t1 MIKPKLDLMSHMLTLTYKDMERLTLPLDVDITGDVRRNDSTAVCSSKVCGDRIQGIDCGEEAAEWLSQALQRPGCRLIQQ DTASHRKTKLADSGVNTKDSVHQSISLANESQYLLVTRSSMEKLKQKIQEGTCNGQQGQEDVELENLINRFRGNLVIGGG CPLEEDSWSEIQIGAHNFMSQGGCSRCQMICLDQENGTRSKEPLRTLAVWRGRKVTFGIHIRNKEYIKGTLLRIGDPVHV IRTSSEQ |
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