Gene
| Gene Model ID | pfu_aug1.0_39360.1_70311 |
|---|---|
| Locus | scaffold39360.1 : 11 ... 5709 : + |
| To GenomeBrowser | scaffold39360.1:11..5709 |
| Genes list of scaffold | scaffold39360.1 |
| Synonym | pfu_aug2.0_131.1_03680 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_39360.1_70311.t1 | 1 | 1 | zf-C3Hc3H | 288 | 352 | 5.1e-14 | 52.0 | 7.9e-18 | 1.2e-13 | 50.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_39360.1_70311.t1 | gi|62702142|gb|AAX93069.1| | 4.0e-22 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_39360.1_70311.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_39360.1_70311.t1 atgacgagtagtggcagtgttaccatggcaacgcatggacagatcaaacaaactgcatgtaaacctccaccaccccctta cactaaaagtgtcatggaaaatcggagctcggtcagtagtgttaccgtggcaacaacagtgtcaacgatggcatcaagtt atgtgaacagtacctcaaataggacgacaaattgtgcatcagacgtaaaaaatcccccagtgacaaaagtagcgttgtac ggtggtctacctcccccacctccttatacgagcaaagttcagaaaaacgtgaagtcaaaacggcaatcttatactcccct ctctatagctgtcgttcctcacctagagaaatcagacattaccaagtcacggaaagtcaaacatatagtggaagagaatg atatagccaaaaagttaaagacggagtctagcaggatgttttacaaacgttacgtgaataaaagacagtttgatcacagt tttatgggctcaggtttgaatagctcagaggaggaagattctagtgaaaatgaggaagaaaacatgttaccatggcaacc tcggtggtttatagaatcttcagatgatgaagctttagaggaagatgaacaagacgatgctttacgtacaacaaaactgg cgttgctccgggccaggttacgacgtcagtgtttccagtctcgtacttctgcaaagtcaaacgtttctgagcaccagaac aacaatagtacgacactggctttaatacaagctatccgagagaacccgaagaacactgtggaagctctaaacgtcataga aagacaacctgagagagtggtcgacaagtacaagttacgaggccttctccctcggcagtgctgtaacaaaaacaatgaaa acgtgcaatgcaaaaatcctgtccttccctacaccaatcactgtctcaaacatgttatgtacaatgtagaccagcagata tttgattattgtacggctaagttcgctgataacacacagtgttgtatgccggtatttgatatcagacatgaactaccact ctgtatggaacacgctgttaaagct |
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Protein
| Protein ID | pfu_aug1.0_39360.1_70311.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_39360.1_70311.t1 MTSSGSVTMATHGQIKQTACKPPPPPYTKSVMENRSSVSSVTVATTVSTMASSYVNSTSNRTTNCASDVKNPPVTKVALY GGLPPPPPYTSKVQKNVKSKRQSYTPLSIAVVPHLEKSDITKSRKVKHIVEENDIAKKLKTESSRMFYKRYVNKRQFDHS FMGSGLNSSEEEDSSENEEENMLPWQPRWFIESSDDEALEEDEQDDALRTTKLALLRARLRRQCFQSRTSAKSNVSEHQN NNSTTLALIQAIRENPKNTVEALNVIERQPERVVDKYKLRGLLPRQCCNKNNENVQCKNPVLPYTNHCLKHVMYNVDQQI FDYCTAKFADNTQCCMPVFDIRHELPLCMEHAVKA |
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