Gene
| Gene Model ID | pfu_aug1.0_39374.1_26884 |
|---|---|
| Locus | scaffold39374.1 : 1736 ... 4628 : + |
| To GenomeBrowser | scaffold39374.1:1736..4628 |
| Genes list of scaffold | scaffold39374.1 |
| Synonym | pfu_aug2.0_1507.1_24966 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_39374.1_26884.t1 | 2 | 1 | CENP-B_N | 4 | 54 | 1.8e-08 | 33.6 | 2.0e-11 | 1.0e-07 | 31.2 |
| pfu_aug1.0_39374.1_26884.t1 | 1 | 1 | HTH_Tnp_Tc5 | 77 | 132 | 2.0e-13 | 49.9 | 1.4e-16 | 7.0e-13 | 48.1 |
| pfu_aug1.0_39374.1_26884.t1 | 2 | 1 | DDE_1 | 161 | 216 | 1.8e-20 | 73.0 | 3.6e-10 | 1.8e-06 | 27.2 |
| pfu_aug1.0_39374.1_26884.t1 | 2 | 2 | DDE_1 | 241 | 321 | 1.8e-20 | 73.0 | 5.5e-15 | 2.7e-11 | 43.0 |
| pfu_aug1.0_39374.1_26884.t1 | 2 | 2 | CENP-B_N | 282 | 301 | 1.8e-08 | 33.6 | 0.27 | 1300.0 | -1.2 |
Transcript
| Transcript ID | pfu_aug1.0_39374.1_26884.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_39374.1_26884.t1 atggcgctgaaaagaaaaagaacagacctatccctggctgataaatatgaagcggtgatgctcctggaacagaaccccca gacagcgattgccaagaagttcggctgtttccaggctcaagtctccaacatctccaagaacagggatgccatccgcaaag aataccaatccaattccaatccagacaagaagagacaccaatctgggaaggcagtcgacgtggggggagccctgacccaa tggtttacggaggcccggtccacagacatccccctatccggacctatcctggcagagagggccgctgacctagccaagca cctgaataagcctgacttctccgctaccaatggctggctagagagatggaagtccaggaacaacatcggattcaagagaa tgcatggtgagaagaaggacaccgatgagggagcagccactcaatggaaggagagcaccttgccaacgttccccccttcc taccatccagacgatatatataatgcggacgagatgggcatctactttagagcactaccggacgggaccccgaccttcaa aacagacaacagtggaggattcaagaagtccaaggagagggtgactgtacacgtttgcaccaacatgaccgggaccgaca aaagaaactgctggacttcaacagggacatggccaggcagaaacgcaagattcttctgttcatcgacaattgctccgctc acccatcgccttgccaacatcaagatggaattcctcccaccaaacactacatcgataatccagtcctgcgtccaggggat aatctgcaacttgaaattctattatcgtagtgaggtgatccagcgaatcatagggaatattgacaatacagagatgacag ccaacaaactcggtaggaagctaacgctcttagatgcagtgcatttactccgtcgagcctggcgttgtgtgaaggagtca acagcgagcagctacagaacagcaggatttgtggcccctgagcagcaggaacattgtgaagatgaagacgaggatgtacc cagtggacttgatgcagagtcattctctactttcgtgtcacatgacgacgatctcccgtgctttgccagccgctctgacg aaaaaatctgcgccgaaatccgagaaaccgccacagatgttgattccgaggatgaagacgacttcaccccccttgagctc cctgtatccgcaactgaagcgcgtgccgccatcgagatgctccataagttccttggtcagaagcaaagtgatgacttcga tcagctgtacgagttggaagacgcttgcgaacgccttattgacacttcaaggaagcggacgaaaatcacagaattcattt attggataccttga |
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Protein
| Protein ID | pfu_aug1.0_39374.1_26884.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_39374.1_26884.t1 MALKRKRTDLSLADKYEAVMLLEQNPQTAIAKKFGCFQAQVSNISKNRDAIRKEYQSNSNPDKKRHQSGKAVDVGGALTQ WFTEARSTDIPLSGPILAERAADLAKHLNKPDFSATNGWLERWKSRNNIGFKRMHGEKKDTDEGAATQWKESTLPTFPPS YHPDDIYNADEMGIYFRALPDGTPTFKTDNSGGFKKSKERVTVHVCTNMTGTDKRNCWTSTGTWPGRNARFFCSSTIAPL THRLANIKMEFLPPNTTSIIQSCVQGIICNLKFYYRSEVIQRIIGNIDNTEMTANKLGRKLTLLDAVHLLRRAWRCVKES TASSYRTAGFVAPEQQEHCEDEDEDVPSGLDAESFSTFVSHDDDLPCFASRSDEKICAEIRETATDVDSEDEDDFTPLEL PVSATEARAAIEMLHKFLGQKQSDDFDQLYELEDACERLIDTSRKRTKITEFIYWIP |
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