Gene
| Gene Model ID | pfu_aug1.0_3941.1_30566 |
|---|---|
| Locus | scaffold3941.1 : 44822 ... 53095 : - |
| To GenomeBrowser | scaffold3941.1:44822..53095 |
| Genes list of scaffold | scaffold3941.1 |
| Synonym | pfu_aug2.0_1812.1_08583 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3941.1_30566.t1 | 1 | 1 | NACHT | 84 | 263 | 6.2e-11 | 42.2 | 1.2e-12 | 5.7e-09 | 35.8 |
Transcript
| Transcript ID | pfu_aug1.0_3941.1_30566.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3941.1_30566.t1 atgcaccgacaaaatgttccggatttcaacaatctgcgtggcaaaatacgctctatcaatgaatccgaggcagacaaaat tcaaatacttcctttcaaaagagacgatactatagaggttgaaaaaatatacgttcaaatatcgatagtagatgaatacg aaaaacgaaatatcacaacgactaatgaaagtgaagtttcaaatctcacaccagaaaagatctttcatgcccaacttgga aaaccagcgcgttttgttttcatgctcggggaggctggatatggaaaaacagtacagtgtcagagaattgcgaaatcatg gtgcgaagcgtggcttcatgaatccaaggaagtaaaagaaataccacattttgcgtctgatatggaaaaatgtctcaaag aatttgaatttcttttcttcgttcaaatgcgtgatgtatcgaacaaacatgtgtccctgataaaaatcatacaggatgta tatagtcaataccatctatcaaaagacagtttaaaaaatatcaaaagaattctcactcacaaccatataaaaagtcttgt tcttctagacggacttgatgattggaatatatctgaagataagagggaacatcttttggataaatggataccaaactgta gggacatgccagcatgtacaattttaatttcaatgaggtcctggaagtttatagatgttgaagtaatatgtcggcgaaaa ttggacagagtaatacgtttaaatggtctgaacgaagattctatgaaacgacttaccacaaacattctatgcaattatat caagataaacatagaatcagacgaattcagacaaagatatcaaagtgttctgaagactatttcctctgtatcatttgagt taaaatccctaatgaaaattccattactagcagttttcacggttcttacattatatgaggaggttgaaactggatattcc cttacaaccttttatctttcaatggttgaggctcttatcaagagatcagtcgaaaagcagcaaactgaagttaaacaaac aacattttgtcaaactgaaacaactttccccagcaaattagaggagtatgcgcttatcactctacacttacctcagttat taaaacttgggaaaatagctttcgaaaatctagtttctgaatattcatcattggtattttgcaccagtcgattgaataca caaattgacaatgaagacttagacctatatcttaggactggactattaattgaagacacaccatcttcgaatgagttaag gaagttccaccaacacaacattcgaataagttttcttcataaaaccattcaagaatttctcgcagctctctacatattct atgggaagagagagaccaatatcataaaatctgtttccgctgaagttaaaacaattgcgaaagtattgaaattttcttac gttcttactttcttgtctggactctctcctggtgttggttgcaaaatatcaagtctcatcaaagaattggcaagcaaaga taaggatatctgcaattatcgtgaccattttgaggctgaaagttatcaaaaagttttctacctatacaatttgcaattac ggtgctatagagaagtaaggggtactaaatcaattaaaacctttgaaaatataggacggaatcctaagttttcgttcaca gatataatcgtaattgctaacgattcggaaaaggtaacaataagagaatcagccgaagttctagaatttcatgcaaacag catcatttcactaaatgttgtaggtatttcggatgaaaaagaagatggaatcaccaatggcgagataaaacatttcttgg ataaaagtttgtctctagagtccctatacatcgatggatatattaatggacactgtagactgttcaataattacagtcaa agaatgtctcgtttacgaacgttaggtttagcgaatgttgcattcaaaggtaacagtcttgaggacttattattgaaaaa gaaatcaacagaaaatatccgtgccttgggactcttataccttaagtcggcggattatttacgcgttgacttcgaatatc gtatgccatcaattcattggatcagcacggggagatcagggtttgtgcggaagattcgttcattgtctacaaaatcaggc cgtcgtccgaagttggagaggagaaataggcttttcacggatttctttgaaatccttccagaatacaaacaattatcaac attgtatataacttacatggaagctgaaacggatagacaaacattccgaaaagttttgccggaattgagaaaattaaaaa cattacatcatattggatatcgtggaagctcaatctatcccattcctgactacgaatatgacgctgaaataataacaatg atcatgcaattgagaaaacttcggaggattcacctccgtgaaatccacttggagaaaaacattctgagtttcgaatttat gacaaaactggaacgtatctggttaggaatgtttgaaatgaactcgcctcgtgactgggaggattttcttttgtcattgt ccaaaattaatacgcttgaaagggttactctatatgacacaaatattggcgctgaagtgttagataaatttaaatcaaag tcttctaggaacttgaatattttaaacatcgaaagtaccagttggtga |
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Protein
| Protein ID | pfu_aug1.0_3941.1_30566.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3941.1_30566.t1 MHRQNVPDFNNLRGKIRSINESEADKIQILPFKRDDTIEVEKIYVQISIVDEYEKRNITTTNESEVSNLTPEKIFHAQLG KPARFVFMLGEAGYGKTVQCQRIAKSWCEAWLHESKEVKEIPHFASDMEKCLKEFEFLFFVQMRDVSNKHVSLIKIIQDV YSQYHLSKDSLKNIKRILTHNHIKSLVLLDGLDDWNISEDKREHLLDKWIPNCRDMPACTILISMRSWKFIDVEVICRRK LDRVIRLNGLNEDSMKRLTTNILCNYIKINIESDEFRQRYQSVLKTISSVSFELKSLMKIPLLAVFTVLTLYEEVETGYS LTTFYLSMVEALIKRSVEKQQTEVKQTTFCQTETTFPSKLEEYALITLHLPQLLKLGKIAFENLVSEYSSLVFCTSRLNT QIDNEDLDLYLRTGLLIEDTPSSNELRKFHQHNIRISFLHKTIQEFLAALYIFYGKRETNIIKSVSAEVKTIAKVLKFSY VLTFLSGLSPGVGCKISSLIKELASKDKDICNYRDHFEAESYQKVFYLYNLQLRCYREVRGTKSIKTFENIGRNPKFSFT DIIVIANDSEKVTIRESAEVLEFHANSIISLNVVGISDEKEDGITNGEIKHFLDKSLSLESLYIDGYINGHCRLFNNYSQ RMSRLRTLGLANVAFKGNSLEDLLLKKKSTENIRALGLLYLKSADYLRVDFEYRMPSIHWISTGRSGFVRKIRSLSTKSG RRPKLERRNRLFTDFFEILPEYKQLSTLYITYMEAETDRQTFRKVLPELRKLKTLHHIGYRGSSIYPIPDYEYDAEIITM IMQLRKLRRIHLREIHLEKNILSFEFMTKLERIWLGMFEMNSPRDWEDFLLSLSKINTLERVTLYDTNIGAEVLDKFKSK SSRNLNILNIESTSW |
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