Gene
| Gene Model ID | pfu_aug1.0_3952.1_44833 |
|---|---|
| Locus | scaffold3952.1 : 19401 ... 30935 : - |
| To GenomeBrowser | scaffold3952.1:19401..30935 |
| Genes list of scaffold | scaffold3952.1 |
| Synonym | pfu_aug2.0_188.1_27010 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3952.1_44833.t1 | 2 | 1 | CENP-M | 76 | 136 | 1.6e-15 | 56.8 | 1.3e-09 | 9.3e-06 | 24.9 |
| pfu_aug1.0_3952.1_44833.t1 | 2 | 2 | CENP-M | 141 | 214 | 1.6e-15 | 56.8 | 3.5e-11 | 2.6e-07 | 30.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3952.1_44833.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3952.1_44833.t1 atgtatttattcatttattacgaagtttcggttgttgttcaggagaaagtttatctcttgaaccatttgcctttgggaca tggcttttatatccgcaggaaaaagtccgaaacagtccgacaaagtattcggaagcattaccgccaacttcaaagcgaaa ataggctttcgaaatgtaaatacaatttaaaaggaccaaagatgaacaggaatggtttaatcaaggaacaaagagtaacg attttgttagtaggtgcagagttagttgggaagcatacctttgccaaggctttacttcaagcaagcacttttcctcttcg aatttgtaaaaccctacagctgcccatcgataacatagaggagaatgaccgacctcactttattgtttacatggtggatc tgacctgcagggagaggtacgtacagtacgtaatacagaaagtgaagtgtcctgagagaagagcttttgatttggatgcc ttaacaaatttagctcatcgacattactgtgaagtttattatggcagtttggagactgagatggagaaagacgttctggc caaacagattatacgtgttagtgaaatagcgtgtggacaaaaacacaatgtgactccattattagtagaaagtacaaaat ggttttcagaacagtattttttgtaa |
|
Protein
| Protein ID | pfu_aug1.0_3952.1_44833.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3952.1_44833.t1 MYLFIYYEVSVVVQEKVYLLNHLPLGHGFYIRRKKSETVRQSIRKHYRQLQSENRLSKCKYNLKGPKMNRNGLIKEQRVT ILLVGAELVGKHTFAKALLQASTFPLRICKTLQLPIDNIEENDRPHFIVYMVDLTCRERYVQYVIQKVKCPERRAFDLDA LTNLAHRHYCEVYYGSLETEMEKDVLAKQIIRVSEIACGQKHNVTPLLVESTKWFSEQYFL |
|