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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_39550.1_26892
Locus scaffold39550.1 : 2 ... 4850 : +
To GenomeBrowser scaffold39550.1:2..4850
Genes list of scaffold scaffold39550.1
Synonym pfu_aug2.0_392.1_07444

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_39550.1_26892.t1 29 1 LRR_1 72 86 0.0 163.3 0.58 1400.0 0.0
pfu_aug1.0_39550.1_26892.t1 22 1 LRR_4 74 104 0.0 236.7 2.3e-05 0.058 13.0
pfu_aug1.0_39550.1_26892.t1 12 1 LRR_8 74 124 0.0 217.2 8.2e-10 2.0e-06 27.4
pfu_aug1.0_39550.1_26892.t1 8 1 LRR_9 87 164 6.1e-09 35.6 0.00086 2.1 7.8
pfu_aug1.0_39550.1_26892.t1 22 2 LRR_4 89 129 0.0 236.7 2.1e-11 5.3e-08 32.3
pfu_aug1.0_39550.1_26892.t1 21 1 LRR_6 89 102 9.4e-21 71.5 0.98 2400.0 -0.8
pfu_aug1.0_39550.1_26892.t1 29 2 LRR_1 90 110 0.0 163.3 0.0071 18.0 5.8
pfu_aug1.0_39550.1_26892.t1 22 1 LRR_7 90 105 1.5e-20 69.6 0.57 1400.0 0.3
pfu_aug1.0_39550.1_26892.t1 21 2 LRR_6 111 125 9.4e-21 71.5 0.018 45.0 4.5
pfu_aug1.0_39550.1_26892.t1 29 3 LRR_1 113 130 0.0 163.3 0.0018 4.5 7.6
pfu_aug1.0_39550.1_26892.t1 22 2 LRR_7 113 128 1.5e-20 69.6 0.056 140.0 3.4
pfu_aug1.0_39550.1_26892.t1 12 2 LRR_8 138 173 0.0 217.2 0.00055 1.4 8.7
pfu_aug1.0_39550.1_26892.t1 29 4 LRR_1 138 155 0.0 163.3 0.048 120.0 3.3
pfu_aug1.0_39550.1_26892.t1 22 3 LRR_7 139 151 1.5e-20 69.6 0.26 650.0 1.3
pfu_aug1.0_39550.1_26892.t1 22 3 LRR_4 140 173 0.0 236.7 0.00028 0.7 9.5
pfu_aug1.0_39550.1_26892.t1 21 3 LRR_6 157 170 9.4e-21 71.5 0.029 71.0 3.9
pfu_aug1.0_39550.1_26892.t1 29 5 LRR_1 158 172 0.0 163.3 0.027 66.0 4.1
pfu_aug1.0_39550.1_26892.t1 22 4 LRR_7 159 171 1.5e-20 69.6 0.22 540.0 1.6
pfu_aug1.0_39550.1_26892.t1 8 2 LRR_9 182 259 6.1e-09 35.6 0.018 44.0 3.5
pfu_aug1.0_39550.1_26892.t1 12 3 LRR_8 182 236 0.0 217.2 4.0e-11 1.0e-07 31.6
pfu_aug1.0_39550.1_26892.t1 29 6 LRR_1 182 196 0.0 163.3 0.0089 22.0 5.5
pfu_aug1.0_39550.1_26892.t1 22 4 LRR_4 183 195 0.0 236.7 0.0071 18.0 5.1
pfu_aug1.0_39550.1_26892.t1 21 4 LRR_6 183 191 9.4e-21 71.5 0.41 1000.0 0.3
pfu_aug1.0_39550.1_26892.t1 22 5 LRR_7 184 194 1.5e-20 69.6 0.68 1700.0 0.1
pfu_aug1.0_39550.1_26892.t1 22 5 LRR_4 201 241 0.0 236.7 4.8e-09 1.2e-05 24.8
pfu_aug1.0_39550.1_26892.t1 21 5 LRR_6 201 214 9.4e-21 71.5 0.023 57.0 4.2
pfu_aug1.0_39550.1_26892.t1 22 6 LRR_7 201 215 1.5e-20 69.6 0.1 260.0 2.6
pfu_aug1.0_39550.1_26892.t1 29 7 LRR_1 202 223 0.0 163.3 0.0047 12.0 6.4
pfu_aug1.0_39550.1_26892.t1 21 6 LRR_6 223 236 9.4e-21 71.5 0.013 31.0 5.0
pfu_aug1.0_39550.1_26892.t1 22 7 LRR_7 224 240 1.5e-20 69.6 0.013 32.0 5.3
pfu_aug1.0_39550.1_26892.t1 29 8 LRR_1 225 242 0.0 163.3 0.00087 2.2 8.6
pfu_aug1.0_39550.1_26892.t1 12 4 LRR_8 247 283 0.0 217.2 6.0e-06 0.015 15.0
pfu_aug1.0_39550.1_26892.t1 21 7 LRR_6 247 260 9.4e-21 71.5 0.013 32.0 5.0
pfu_aug1.0_39550.1_26892.t1 22 6 LRR_4 249 284 0.0 236.7 4.7e-07 0.0012 18.4
pfu_aug1.0_39550.1_26892.t1 29 9 LRR_1 249 269 0.0 163.3 5.1e-05 0.13 12.4
pfu_aug1.0_39550.1_26892.t1 22 8 LRR_7 249 263 1.5e-20 69.6 0.0043 11.0 6.7
pfu_aug1.0_39550.1_26892.t1 8 3 LRR_9 267 345 6.1e-09 35.6 1.2e-05 0.03 13.8
pfu_aug1.0_39550.1_26892.t1 29 10 LRR_1 275 293 0.0 163.3 0.15 360.0 1.8
pfu_aug1.0_39550.1_26892.t1 22 7 LRR_4 277 310 0.0 236.7 3.3e-07 0.00081 18.9
pfu_aug1.0_39550.1_26892.t1 12 5 LRR_8 291 329 0.0 217.2 1.8e-05 0.044 13.5
pfu_aug1.0_39550.1_26892.t1 21 8 LRR_6 293 306 9.4e-21 71.5 0.034 84.0 3.7
pfu_aug1.0_39550.1_26892.t1 22 8 LRR_4 295 333 0.0 236.7 3.0e-08 7.5e-05 22.2
pfu_aug1.0_39550.1_26892.t1 29 11 LRR_1 295 315 0.0 163.3 0.00022 0.54 10.4
pfu_aug1.0_39550.1_26892.t1 22 9 LRR_7 295 310 1.5e-20 69.6 0.011 27.0 5.5
pfu_aug1.0_39550.1_26892.t1 21 9 LRR_6 316 330 9.4e-21 71.5 0.039 96.0 3.5
pfu_aug1.0_39550.1_26892.t1 22 10 LRR_7 317 331 1.5e-20 69.6 0.12 300.0 2.3
pfu_aug1.0_39550.1_26892.t1 29 12 LRR_1 319 331 0.0 163.3 0.62 1500.0 -0.1
pfu_aug1.0_39550.1_26892.t1 22 9 LRR_4 321 351 0.0 236.7 0.00075 1.9 8.2
pfu_aug1.0_39550.1_26892.t1 21 10 LRR_6 338 350 9.4e-21 71.5 0.024 59.0 4.1
pfu_aug1.0_39550.1_26892.t1 22 10 LRR_4 339 372 0.0 236.7 2.0e-05 0.05 13.2
pfu_aug1.0_39550.1_26892.t1 12 6 LRR_8 340 397 0.0 217.2 1.2e-09 2.9e-06 26.9
pfu_aug1.0_39550.1_26892.t1 29 13 LRR_1 340 356 0.0 163.3 0.035 87.0 3.7
pfu_aug1.0_39550.1_26892.t1 21 11 LRR_6 361 375 9.4e-21 71.5 0.0066 16.0 5.9
pfu_aug1.0_39550.1_26892.t1 8 4 LRR_9 362 429 6.1e-09 35.6 0.0073 18.0 4.8
pfu_aug1.0_39550.1_26892.t1 22 11 LRR_4 362 398 0.0 236.7 2.2e-09 5.5e-06 25.8
pfu_aug1.0_39550.1_26892.t1 29 14 LRR_1 363 382 0.0 163.3 0.00087 2.2 8.6
pfu_aug1.0_39550.1_26892.t1 22 11 LRR_7 363 378 1.5e-20 69.6 0.017 41.0 5.0
pfu_aug1.0_39550.1_26892.t1 21 12 LRR_6 385 398 9.4e-21 71.5 0.25 610.0 1.0
pfu_aug1.0_39550.1_26892.t1 29 15 LRR_1 386 402 0.0 163.3 0.0038 9.4 6.7
pfu_aug1.0_39550.1_26892.t1 22 12 LRR_7 386 401 1.5e-20 69.6 0.02 50.0 4.7
pfu_aug1.0_39550.1_26892.t1 8 5 LRR_9 389 478 6.1e-09 35.6 0.0043 11.0 5.5
pfu_aug1.0_39550.1_26892.t1 22 12 LRR_4 410 446 0.0 236.7 6.4e-12 1.6e-08 33.9
pfu_aug1.0_39550.1_26892.t1 12 7 LRR_8 410 466 0.0 217.2 1.5e-10 3.8e-07 29.7
pfu_aug1.0_39550.1_26892.t1 29 16 LRR_1 410 430 0.0 163.3 3.6e-05 0.088 12.8
pfu_aug1.0_39550.1_26892.t1 21 13 LRR_6 410 421 9.4e-21 71.5 0.0032 7.9 6.8
pfu_aug1.0_39550.1_26892.t1 22 13 LRR_7 410 424 1.5e-20 69.6 0.00013 0.33 11.3
pfu_aug1.0_39550.1_26892.t1 21 14 LRR_6 430 443 9.4e-21 71.5 0.014 36.0 4.8
pfu_aug1.0_39550.1_26892.t1 29 17 LRR_1 432 450 0.0 163.3 0.035 87.0 3.7
pfu_aug1.0_39550.1_26892.t1 22 14 LRR_7 432 443 1.5e-20 69.6 0.54 1300.0 0.4
pfu_aug1.0_39550.1_26892.t1 29 18 LRR_1 455 468 0.0 163.3 0.66 1600.0 -0.2
pfu_aug1.0_39550.1_26892.t1 22 15 LRR_7 455 469 1.5e-20 69.6 0.76 1900.0 0.0
pfu_aug1.0_39550.1_26892.t1 22 13 LRR_4 456 486 0.0 236.7 0.0054 13.0 5.4
pfu_aug1.0_39550.1_26892.t1 21 15 LRR_6 473 485 9.4e-21 71.5 0.0043 11.0 6.5
pfu_aug1.0_39550.1_26892.t1 22 16 LRR_7 474 485 1.5e-20 69.6 0.031 76.0 4.2
pfu_aug1.0_39550.1_26892.t1 12 8 LRR_8 475 485 0.0 217.2 0.11 270.0 1.4
pfu_aug1.0_39550.1_26892.t1 29 19 LRR_1 475 486 0.0 163.3 0.0086 21.0 5.6
pfu_aug1.0_39550.1_26892.t1 8 6 LRR_9 492 516 6.1e-09 35.6 0.084 210.0 1.3
pfu_aug1.0_39550.1_26892.t1 12 9 LRR_8 506 563 0.0 217.2 1.6e-07 0.00041 20.0
pfu_aug1.0_39550.1_26892.t1 22 14 LRR_4 507 544 0.0 236.7 6.3e-08 0.00016 21.2
pfu_aug1.0_39550.1_26892.t1 29 20 LRR_1 507 527 0.0 163.3 0.69 1700.0 -0.2
pfu_aug1.0_39550.1_26892.t1 8 7 LRR_9 528 556 6.1e-09 35.6 0.0075 19.0 4.7
pfu_aug1.0_39550.1_26892.t1 21 16 LRR_6 529 545 9.4e-21 71.5 0.0015 3.6 7.9
pfu_aug1.0_39550.1_26892.t1 22 17 LRR_7 530 544 1.5e-20 69.6 0.0049 12.0 6.6
pfu_aug1.0_39550.1_26892.t1 22 15 LRR_4 531 567 0.0 236.7 4.2e-09 1.0e-05 25.0
pfu_aug1.0_39550.1_26892.t1 29 21 LRR_1 531 546 0.0 163.3 0.00076 1.9 8.8
pfu_aug1.0_39550.1_26892.t1 12 10 LRR_8 552 609 0.0 217.2 1.8e-12 4.4e-09 35.9
pfu_aug1.0_39550.1_26892.t1 22 16 LRR_4 553 590 0.0 236.7 4.8e-09 1.2e-05 24.7
pfu_aug1.0_39550.1_26892.t1 29 22 LRR_1 553 568 0.0 163.3 0.054 130.0 3.2
pfu_aug1.0_39550.1_26892.t1 21 17 LRR_6 553 565 9.4e-21 71.5 0.072 180.0 2.7
pfu_aug1.0_39550.1_26892.t1 22 18 LRR_7 553 567 1.5e-20 69.6 0.24 590.0 1.5
pfu_aug1.0_39550.1_26892.t1 21 18 LRR_6 573 587 9.4e-21 71.5 0.0087 21.0 5.5
pfu_aug1.0_39550.1_26892.t1 22 17 LRR_4 575 610 0.0 236.7 1.0e-09 2.6e-06 26.9
pfu_aug1.0_39550.1_26892.t1 29 23 LRR_1 575 591 0.0 163.3 0.0055 14.0 6.2
pfu_aug1.0_39550.1_26892.t1 22 19 LRR_7 575 588 1.5e-20 69.6 0.029 72.0 4.2
pfu_aug1.0_39550.1_26892.t1 8 8 LRR_9 595 697 6.1e-09 35.6 0.00064 1.6 8.2
pfu_aug1.0_39550.1_26892.t1 22 18 LRR_4 598 633 0.0 236.7 3.5e-05 0.086 12.4
pfu_aug1.0_39550.1_26892.t1 29 24 LRR_1 598 619 0.0 163.3 6.0e-06 0.015 15.2
pfu_aug1.0_39550.1_26892.t1 21 19 LRR_6 598 610 9.4e-21 71.5 0.0093 23.0 5.4
pfu_aug1.0_39550.1_26892.t1 22 20 LRR_7 598 612 1.5e-20 69.6 0.0049 12.0 6.6
pfu_aug1.0_39550.1_26892.t1 12 11 LRR_8 612 656 0.0 217.2 3.6e-07 0.00089 18.9
pfu_aug1.0_39550.1_26892.t1 29 25 LRR_1 622 641 0.0 163.3 0.015 37.0 4.9
pfu_aug1.0_39550.1_26892.t1 22 19 LRR_4 626 657 0.0 236.7 0.0064 16.0 5.2
pfu_aug1.0_39550.1_26892.t1 29 26 LRR_1 645 663 0.0 163.3 0.048 120.0 3.3
pfu_aug1.0_39550.1_26892.t1 22 20 LRR_4 648 683 0.0 236.7 0.00072 1.8 8.2
pfu_aug1.0_39550.1_26892.t1 21 20 LRR_6 648 657 9.4e-21 71.5 0.62 1500.0 -0.2
pfu_aug1.0_39550.1_26892.t1 22 21 LRR_4 668 706 0.0 236.7 5.6e-09 1.4e-05 24.6
pfu_aug1.0_39550.1_26892.t1 12 12 LRR_8 668 725 0.0 217.2 2.6e-09 6.4e-06 25.8
pfu_aug1.0_39550.1_26892.t1 29 27 LRR_1 668 685 0.0 163.3 0.042 100.0 3.5
pfu_aug1.0_39550.1_26892.t1 22 21 LRR_7 668 683 1.5e-20 69.6 0.023 56.0 4.6
pfu_aug1.0_39550.1_26892.t1 21 21 LRR_6 689 702 9.4e-21 71.5 0.009 22.0 5.5
pfu_aug1.0_39550.1_26892.t1 22 22 LRR_4 690 726 0.0 236.7 1.3e-09 3.3e-06 26.5
pfu_aug1.0_39550.1_26892.t1 22 22 LRR_7 691 706 1.5e-20 69.6 0.0046 11.0 6.7
pfu_aug1.0_39550.1_26892.t1 29 28 LRR_1 691 710 0.0 163.3 4.9e-05 0.12 12.4
pfu_aug1.0_39550.1_26892.t1 29 29 LRR_1 715 727 0.0 163.3 0.55 1400.0 0.1

Transcript
Transcript IDpfu_aug1.0_39550.1_26892.t1
Definition-
>pfu_aug1.0_39550.1_26892.t1
atgagcgctagacggaagaagaaggatgagaaacccccacccgccatcggcccggggagtaaaataatttctctcccaga
tcctcttaagaaattcttgaagcgcctccctgacagcaagaaggttcacatgaaattcggcaccgcaaacttcaaatctt
tgccgacagaaatttacaacaacgaggagcttgcagaactagccgttcgttttaatgccgaaaacaaccgactgaagcga
cttccgaaagcaatatcggtgttggaaaatttagaatacatagatgtgaaaaataatgcattgtctgcattccctggctc
ggtgtccaagctgaaaaagttggaaattttggatattgagaacaatgccatcaaaaagcttccgccagctatacacaagg
catcggggctcgtccagttattggcatcgaataacaggatccgaactctgccgaaaaacatcgggaaatcctctattact
tatttggacgtgtcaggtaacttgatcaagtcatttaagaaaggcgtgtacgaaatgacggcggaagtcaatctctccga
caaccggataacggaaatgccaccggcgagcgtcaaaaagccgaatatacagaagctcaacctagcaagaaacggtgtca
ccttcatgccggataatatcgacaagttaacgcggttgacatggattgatttatcccataatgccttacaggaacttccc
gctcaaatcggaggagtcaaattcctgcactatctagatatatcgcacaatcacattaaggcccttccggaggaaatttg
taatctagcgtacgcgctcgattttttcgacgcatcacacaatgaaatccccgttctgcctaacgacattcataaattgc
aaaaattgcgtcattttgacgtttctggaaatgaaatcgaatatttgccggagggaatcaacaagctgccgtgtctcctg
acattatgtgtctcaaacaacaaactcaaatcgatgaagtttgcggtttatctgaagcagctagaacatcttcacatgtc
caaaaacgaagtagaggtggtaccccaggaggtcgaccaaatgaagagcttgatcacactagatatctcgtggaacaagg
taaaggagatacctgatgctctcggcaaggtgaagagccttaaagctttaaatgtctgcggaaacaagctgaccgtgtta
cctgataaaataggagtcgaacaagtgctaacttctcttgatatctcgcacaatcgcctgaccgcgttgccacaagatct
acgcaaacttcgcaatctggagactttccacataagtcataatgaaatcccagcgatgccaaagtcaatcgattacctct
atcagttgaggtccttagatatagctactaaccttatcaatgaactcaacctaccgaaaaccttgaccagtttgaattta
tcggataatccgctcgcaattaatccgtcggacatgcgttccgctattgtagtcatgggagacaaggatcacctaagaaa
cctgacgtcattaacattatgtagcctcggtttggatgaacttccgccgagcgtctacaacctgcgatgtctaaagcatt
tgaatgtttcaaacaattcgctcaagaaccttggagaggtgtgtaagcttaggggactcgagtcattaaatgccggaaac
aacgaaatttccggacttccgagcaaaatcggcactatgtgcaaactccagcaattacatatatctcataatgaaattag
cgaattccaaccaaccatggtgaagttggtgtcattgcgtgaactagatatgtcgcacaacaaactaagcttacttccgg
ataatttcggggatttgaacaaacttattgcgatggacttgtcgcacaatgaaatactgacatttccaaaggaccaaata
gacgtattagcttcacttcttagactcaatatttctgaaaaccatatagacgttatgccaatggaattcccttacttgta
tcgattgcaagttttaaaagccgctggtaacgaccttaaatcccttccttcggaaatggataagatgaaatctctgcaga
ttttagatttatccgataacgtcttggaatcacttccggaacggatatgtaaaatgccagaaataaaagaaatcgatgtc
accgacaacaaaataactgtgggatggccaaaagcatgggaaaacctcagacagaaaataacaattaagagcgctgatca
gtccgcctacaagaagcgggaaccgcgcgaacgaccgtccgacaaagtagccgagacgcaagtttccccgaaaccaagca
agaaaggcatcaagaaaaaggtttccccgataggaaccccacctactcctattaaaggtgcgcgtgagaaatcggctccc
gtgaagtga

Protein
Protein IDpfu_aug1.0_39550.1_26892.t1
Definition-
>pfu_aug1.0_39550.1_26892.t1
MSARRKKKDEKPPPAIGPGSKIISLPDPLKKFLKRLPDSKKVHMKFGTANFKSLPTEIYNNEELAELAVRFNAENNRLKR
LPKAISVLENLEYIDVKNNALSAFPGSVSKLKKLEILDIENNAIKKLPPAIHKASGLVQLLASNNRIRTLPKNIGKSSIT
YLDVSGNLIKSFKKGVYEMTAEVNLSDNRITEMPPASVKKPNIQKLNLARNGVTFMPDNIDKLTRLTWIDLSHNALQELP
AQIGGVKFLHYLDISHNHIKALPEEICNLAYALDFFDASHNEIPVLPNDIHKLQKLRHFDVSGNEIEYLPEGINKLPCLL
TLCVSNNKLKSMKFAVYLKQLEHLHMSKNEVEVVPQEVDQMKSLITLDISWNKVKEIPDALGKVKSLKALNVCGNKLTVL
PDKIGVEQVLTSLDISHNRLTALPQDLRKLRNLETFHISHNEIPAMPKSIDYLYQLRSLDIATNLINELNLPKTLTSLNL
SDNPLAINPSDMRSAIVVMGDKDHLRNLTSLTLCSLGLDELPPSVYNLRCLKHLNVSNNSLKNLGEVCKLRGLESLNAGN
NEISGLPSKIGTMCKLQQLHISHNEISEFQPTMVKLVSLRELDMSHNKLSLLPDNFGDLNKLIAMDLSHNEILTFPKDQI
DVLASLLRLNISENHIDVMPMEFPYLYRLQVLKAAGNDLKSLPSEMDKMKSLQILDLSDNVLESLPERICKMPEIKEIDV
TDNKITVGWPKAWENLRQKITIKSADQSAYKKREPRERPSDKVAETQVSPKPSKKGIKKKVSPIGTPPTPIKGAREKSAP
VK

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