Gene
| Gene Model ID | pfu_aug1.0_39577.1_34129 |
|---|---|
| Locus | scaffold39577.1 : 1 ... 5624 : - |
| To GenomeBrowser | scaffold39577.1:1..5624 |
| Genes list of scaffold | scaffold39577.1 |
| Synonym | pfu_aug2.0_10089.1_33074 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | Chitinase like protein |
| Description | Chitinase like protein, partial sequence. Hit to BLAST (NCBI, CAI96026.1). |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_39577.1_34129.t1 | 1 | 1 | Glyco_hydro_18 | 5 | 242 | 0.0 | 226.5 | 0.0 | 0.0 | 226.1 |
| pfu_aug1.0_39577.1_34129.t1 | 2 | 1 | CBM_14 | 244 | 295 | 3.4e-25 | 87.7 | 1.0e-15 | 7.7e-12 | 44.9 |
| pfu_aug1.0_39577.1_34129.t1 | 2 | 2 | CBM_14 | 337 | 388 | 3.4e-25 | 87.7 | 7.2e-17 | 5.3e-13 | 48.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_39577.1_34129.t1 | gi|92110432|emb|CAI96026.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_39577.1_34129.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_39577.1_34129.t1 tcttgggaaagtacaagagagtatgttactatacaaactggtcacaatacagatctgggataggaaagttctggccagag gacatcgatcctttcctatgtacccacatcatgtattcctttggaaaactggaaggaaataagataacaaatttcgaatg gaacgacccggatactgattgggctgaaggattatacactcgagttaataatctgaagaaacagaatacagatctgaagg tactcttagcaatgggaggctggaacgctgggagtttagtgtactcccaaatgtcttctacgcccaacaacagaagagaa tttattgactctgccttgacgttcctgagggacaacaactttgatggacttgatatggactgggagtatccggccagaag gggcggggccgccgctgattataccaattttggactgctagttcaggaattacggcaggcattcgaaaacgaagcgacac aaactggtaacgatagattactacttaccgctgccgtagccgctgggaaatcaaacattgacggggcttatgacgtgcct gtaatggctgctaacatggacttcatttgcctgatgacgtatgatttcaacggagcctggggtagtgttactggccacaa cagtccacttgatgcttcctcggctgatgcagacaaaacatggaacatggtatatgatagtcaaatattgttttatataa ggaaaagcttttgtgcagacaagccaaacggattacatggtgatcccggggactgcactggttactacaactgctgggca ggaagagggaaccaactgaaatgttatgggggtcttctatggaaccaggcagtcaaatattgtgattatcccgatcgagt aaattgtgtgagatctgacgtcataaccaagcagccgcctgccacgtcatccagaacaaccgagcagcccgaagttatga cgacaacagtgacaccagtatcttcgaataatccagtggaagggatggattgtacaaagcttgctaatggtttatacaac tatccaggaaactgtaataagtactttacttgttccaacgggagaagatttcaaggatcgtgtcctccttctctccattt caatagttttgcacaaagatgtgattggccaagttttgctggctgtacacaaaaataa |
|
Protein
| Protein ID | pfu_aug1.0_39577.1_34129.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_39577.1_34129.t1 LGKYKRVCYYTNWSQYRSGIGKFWPEDIDPFLCTHIMYSFGKLEGNKITNFEWNDPDTDWAEGLYTRVNNLKKQNTDLKV LLAMGGWNAGSLVYSQMSSTPNNRREFIDSALTFLRDNNFDGLDMDWEYPARRGGAAADYTNFGLLVQELRQAFENEATQ TGNDRLLLTAAVAAGKSNIDGAYDVPVMAANMDFICLMTYDFNGAWGSVTGHNSPLDASSADADKTWNMVYDSQILFYIR KSFCADKPNGLHGDPGDCTGYYNCWAGRGNQLKCYGGLLWNQAVKYCDYPDRVNCVRSDVITKQPPATSSRTTEQPEVMT TTVTPVSSNNPVEGMDCTKLANGLYNYPGNCNKYFTCSNGRRFQGSCPPSLHFNSFAQRCDWPSFAGCTQK |
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