Gene
| Gene Model ID | pfu_aug1.0_3958.1_66844 |
|---|---|
| Locus | scaffold3958.1 : 3478 ... 32255 : - |
| To GenomeBrowser | scaffold3958.1:3478..32255 |
| Genes list of scaffold | scaffold3958.1 |
| Synonym | pfu_aug2.0_4301.1_05973 |
Manual annotation
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3958.1_66844.t1 | gi|348515979|ref|XP_003445517.1| | PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1 [Oreochromis niloticus] | 3.0e-38 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3958.1_66844.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3958.1_66844.t1 atggatttaaaagcactagcaactaaaaggaagaaacccaatacagaatctcagtcttcaaaacctacgaaaaatgattc agaatctgaaacctccgatgatgatgatgaactgattattcgaattctgcgtgtagcatcgcgtaatgtaattatgaact cagcaggtgaggtatccgatagttctgatggagaagtctcagactcagatcaagaagaacagttttacgatgggtatgac gagaatttaattggtgatgaagacgacaggaagatgctagaagctatgacagagaaggaaagagaacaagaactgttcaa caggatagaaagacgtcaagctcttaaaacaagatttgaaattgagaagaaattgaaacaacagaagaagaaagaacaaa agaagaaagaaaaatacccctcctccacaccacaatccaagatagacttaatatcagccagtgatagaagcaaagaaagg aggaaacaaatggaggaaaaaaaagataacaagaaattctcagcacttacagacttggttaaaaggagggaagaaaaaga gaaaaagaaactggaggaagcaaagaaacaagaagagaaacaagatcagaagaagaagccactgaagacgagtgacatct attctgatgatgaggaagatgaagaggaggaggagaggaagcccgaggcagtgaaggaggacaaggcctcagaatctggg tcagagtcagacagtagcagctcacactcctcagctgtacgctccgactcagaggacgagacgattgaatcctccaggaa aatcagatttattcagaccaaagaggaattaggaaaaattattcaagaaaagcagaagtttaagaagaatcctcataatt atgcagtgaagaaaacccttcttctcaagcaaaaggaaatggctgatttggagggtgacacagcatctcaatataaaatc caacaagagttggaggaattagaatccagggcgacagagctcgatagaaaaagaaccaacaacatatcatccataagcta catcaatcagagaaatcgattaagaaaccaaatagaagctgaagaagcctttaagaaggaagtggcagagatgaaaaatg ctaaagctgatccatttacaaggcgatcatgtcgaccaactcttgtcactaaggcacgtgatccagtaatggaggcccag gcacaagccagactggaggagaagcatcgtctccaggcggaggctgctgctgctaggcttccatccaataaatcccccat gaaaggtgataagcgtagatcgtcagaagatttatttgctgtacatgatttcaacatcgaaatagatctagagatgccca ccacaagtaagaactga |
|
Protein
| Protein ID | pfu_aug1.0_3958.1_66844.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3958.1_66844.t1 MDLKALATKRKKPNTESQSSKPTKNDSESETSDDDDELIIRILRVASRNVIMNSAGEVSDSSDGEVSDSDQEEQFYDGYD ENLIGDEDDRKMLEAMTEKEREQELFNRIERRQALKTRFEIEKKLKQQKKKEQKKKEKYPSSTPQSKIDLISASDRSKER RKQMEEKKDNKKFSALTDLVKRREEKEKKKLEEAKKQEEKQDQKKKPLKTSDIYSDDEEDEEEEERKPEAVKEDKASESG SESDSSSSHSSAVRSDSEDETIESSRKIRFIQTKEELGKIIQEKQKFKKNPHNYAVKKTLLLKQKEMADLEGDTASQYKI QQELEELESRATELDRKRTNNISSISYINQRNRLRNQIEAEEAFKKEVAEMKNAKADPFTRRSCRPTLVTKARDPVMEAQ AQARLEEKHRLQAEAAAARLPSNKSPMKGDKRRSSEDLFAVHDFNIEIDLEMPTTSKN |
|