Gene
| Gene Model ID | pfu_aug1.0_396.1_65389 |
|---|---|
| Locus | scaffold396.1 : 65946 ... 74478 : + |
| To GenomeBrowser | scaffold396.1:65946..74478 |
| Genes list of scaffold | scaffold396.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_396.1_65389.t1 | 2 | 1 | Helicase_C | 17 | 34 | 1.7e-08 | 34.1 | 0.014 | 200.0 | 1.9 |
| pfu_aug1.0_396.1_65389.t1 | 2 | 2 | Helicase_C | 34 | 62 | 1.7e-08 | 34.1 | 1.0e-11 | 1.5e-07 | 31.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_396.1_65389.t1 | gi|189236912|ref|XP_969038.2| | 3.0e-20 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_396.1_65389.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_396.1_65389.t1 atgatgatattttgtaacaagcacggcacatcgtactggttgtcggactatcttaacgaaaacggaatcaacaatatgtg tctaaatggagatatgaaacctgaggtcaatcatgtagtaaactatgagttccccgaatacatgtcggattacatacaca gggtggggcgggtagggcgagtagggagtcaaggtcattgtgaggtcaccagttttattgtacacccatgggatgtggaa cttctatggagaatagagacggcagctagaagctccatggagttagaaaatgtgaacgctaatataagacgtaaagagga agcaatgtatgaggaaagaatggaacgtaatctgaaaaataaagatgaaacggatgatgattcatttcaggatgataata ttgaatcaagattttaa |
|
Protein
| Protein ID | pfu_aug1.0_396.1_65389.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_396.1_65389.t1 MMIFCNKHGTSYWLSDYLNENGINNMCLNGDMKPEVNHVVNYEFPEYMSDYIHRVGRVGRVGSQGHCEVTSFIVHPWDVE LLWRIETAARSSMELENVNANIRRKEEAMYEERMERNLKNKDETDDDSFQDDNIESRF |
|