Gene
| Gene Model ID | pfu_aug1.0_396.1_65394 |
|---|---|
| Locus | scaffold396.1 : 130516 ... 140072 : + |
| To GenomeBrowser | scaffold396.1:130516..140072 |
| Genes list of scaffold | scaffold396.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_396.1_65394.t1 | 2 | 1 | Calpain_III | 7 | 109 | 7.0e-23 | 80.8 | 3.0e-26 | 1.5e-22 | 79.8 |
| pfu_aug1.0_396.1_65394.t1 | 2 | 1 | C2 | 9 | 29 | 1.6e-14 | 53.5 | 0.85 | 4200.0 | -2.4 |
| pfu_aug1.0_396.1_65394.t1 | 2 | 2 | C2 | 161 | 219 | 1.6e-14 | 53.5 | 7.2e-18 | 3.6e-14 | 52.3 |
| pfu_aug1.0_396.1_65394.t1 | 2 | 2 | Calpain_III | 197 | 211 | 7.0e-23 | 80.8 | 0.7 | 3500.0 | -2.5 |
Transcript
| Transcript ID | pfu_aug1.0_396.1_65394.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_396.1_65394.t1 atgatatgtatttttcttcagtataagtttgatgtagatgatgctgaggtcgaggtgatgatatcactagagcaatggga tggcagaattaacagggacaaaggacgggacaatgaaaccattggcttctgtgttatgaagacagacagaaacagaaagt accggatgcacgacaccttggagaaagtccaaaccacatcgtacagtaactcccgtaatcagtttgtacgcctcacactg acggagggacgatactgtatcataccaacgacctttgaacctaatgttcaatgtaaatttcttctccgagtttacggcaa ttctgaccctagtctcaaaccattttccgatcttgttggagagcttaaaatgtccaagtcaacatattttgggcgttttg acgaagttgagatgagcttatgctataaccccggtgtccgcgtccgcgtccccgtccgcgtccggttaaagtttttggtc tctgatccctatgtggtgatattttgtgagaaaaagaaagagagaacgaggataatcaaaaacaacattaatccagaatg gaatgagagaatgacgttctatcaccgtaaaccccatgaagacattgatgtagagatttggaattacaacaagattcgtg acgagcttcttggtgcttttgtgattccgatgtcagacaggacccgatacagcagtgctcaccatatccagaaatttgat ctgttcggaaaaggaaaggaatctatagggtaa |
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Protein
| Protein ID | pfu_aug1.0_396.1_65394.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_396.1_65394.t1 MICIFLQYKFDVDDAEVEVMISLEQWDGRINRDKGRDNETIGFCVMKTDRNRKYRMHDTLEKVQTTSYSNSRNQFVRLTL TEGRYCIIPTTFEPNVQCKFLLRVYGNSDPSLKPFSDLVGELKMSKSTYFGRFDEVEMSLCYNPGVRVRVPVRVRLKFLV SDPYVVIFCEKKKERTRIIKNNINPEWNERMTFYHRKPHEDIDVEIWNYNKIRDELLGAFVIPMSDRTRYSSAHHIQKFD LFGKGKESIG |
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