Gene
| Gene Model ID | pfu_aug1.0_3979.1_37760 |
|---|---|
| Locus | scaffold3979.1 : 2524 ... 13965 : - |
| To GenomeBrowser | scaffold3979.1:2524..13965 |
| Genes list of scaffold | scaffold3979.1 |
| Synonym | pfu_aug2.0_825.1_17864 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3979.1_37760.t1 | 4 | 1 | SRCR | 3 | 39 | 9.9e-29 | 99.5 | 0.0025 | 19.0 | 5.6 |
| pfu_aug1.0_3979.1_37760.t1 | 4 | 2 | SRCR | 59 | 94 | 9.9e-29 | 99.5 | 1.2e-06 | 0.0088 | 16.3 |
| pfu_aug1.0_3979.1_37760.t1 | 3 | 1 | SRCR_2 | 82 | 96 | 2.1e-07 | 31.1 | 0.11 | 820.0 | 0.3 |
| pfu_aug1.0_3979.1_37760.t1 | 4 | 3 | SRCR | 97 | 194 | 9.9e-29 | 99.5 | 1.0e-15 | 7.8e-12 | 45.4 |
| pfu_aug1.0_3979.1_37760.t1 | 3 | 2 | SRCR_2 | 103 | 137 | 2.1e-07 | 31.1 | 2.6e-05 | 0.19 | 11.9 |
| pfu_aug1.0_3979.1_37760.t1 | 4 | 4 | SRCR | 209 | 306 | 9.9e-29 | 99.5 | 7.8e-14 | 5.8e-10 | 39.3 |
| pfu_aug1.0_3979.1_37760.t1 | 3 | 3 | SRCR_2 | 224 | 253 | 2.1e-07 | 31.1 | 1.2e-06 | 0.009 | 16.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3979.1_37760.t1 | gi|115803193|ref|XP_781534.2| | 2.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3979.1_37760.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3979.1_37760.t1 atggtaactggtctaaaatgtcctcctaacgccactgactatgggcaatgttctcacagtggcttcggcaatctttgttg tggatgtaaccacagttatgacttagctattaggtgtcacgaaagaccgattggagaggataatcagacattacgactat caggatatgggagaaacgataaaggtcgtgttgagatctggcataatggaagttggatactcgtcgatccttactggctc cagtttcctgaagctaacatgttctgcaaaatgctgggattcagactgaatggttccagtgcgaacgacgggattttaga ggtctatcataacaacagatggaagcttgtctcgtacagaggagaccctaaactggcatctgtggtgtgtcgtcaacttg gattcaggtctggtggcgaaatgtacaagagctacatctgtatagaaggtaattgtgacgtttcggaatcattgtccggc tacacagaatgtacgggtaaagaggataatctcgcacagtgtgaaggacttcaatggacaacgtactggcccttatatgg acgtccaaccggaatccgttgttatggagactatagaccatttgaagtgaagcagacattaaatcagactcacgagggag agatcaagttgaccaaagatggagaagattataggatatgtgctagactgtgggacgacattcatgctagggcagtctgc aaatcattgggctacagtgatggaagcgccaattatatcagggccacacggtatgtaagatacagtggtgagaagatgat aggttcaatgtactgtggacgcggagcagataacatgtatcaatgctttcattcagggtggaactcttacgataaggaat gcttcaatgcctttcctctcactgcggctgtacagtgtattttataa |
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Protein
| Protein ID | pfu_aug1.0_3979.1_37760.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3979.1_37760.t1 MVTGLKCPPNATDYGQCSHSGFGNLCCGCNHSYDLAIRCHERPIGEDNQTLRLSGYGRNDKGRVEIWHNGSWILVDPYWL QFPEANMFCKMLGFRLNGSSANDGILEVYHNNRWKLVSYRGDPKLASVVCRQLGFRSGGEMYKSYICIEGNCDVSESLSG YTECTGKEDNLAQCEGLQWTTYWPLYGRPTGIRCYGDYRPFEVKQTLNQTHEGEIKLTKDGEDYRICARLWDDIHARAVC KSLGYSDGSANYIRATRYVRYSGEKMIGSMYCGRGADNMYQCFHSGWNSYDKECFNAFPLTAAVQCIL |
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