Gene
| Gene Model ID | pfu_aug1.0_3987.1_37763 |
|---|---|
| Locus | scaffold3987.1 : 7074 ... 25455 : - |
| To GenomeBrowser | scaffold3987.1:7074..25455 |
| Genes list of scaffold | scaffold3987.1 |
| Synonym | pfu_aug2.0_402.1_07472 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3987.1_37763.t1 | 2 | 1 | PAT1 | 15 | 211 | 9.4e-31 | 106.8 | 5.6e-24 | 8.2e-20 | 70.6 |
| pfu_aug1.0_3987.1_37763.t1 | 2 | 2 | PAT1 | 230 | 306 | 9.4e-31 | 106.8 | 1.3e-13 | 1.9e-09 | 36.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3987.1_37763.t1 | gi|220673002|emb|CAX12381.1| | 7.0e-30 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3987.1_37763.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3987.1_37763.t1 atgggtgtgcccccagctcgccttatgtctccttacgccaacagagccatgatccatgctatgggtaacagaatgccaac acctcctatgggaattcccaggcctatgggtcagaggcctcctaaccacagcccatatagccaccctcccccaccccatg gtccatatgatggaccccctcctggaccacatcatcagagcccacacagtcatggcagtccatatggacatcatatgaat ggccttcatagaccgcctcatccgaatgatccccggtacaacagaggtcgaggagggcgtggtagaatgatgggtggcaa tagaggtctccatcataacggtgagagtcgagactaccgaccccctggggagcatcagcatcgaccctacccaggagatc accagcaccgcccatacagacgctattataggtttaatgaggaggaggacagaaaacgatcaattgatggctatgccgga ctgatgactcagaaagaaaaagactggatcgtcaaaatccagctgattcagctccagtcagataatccttatttggatga ttactattacactactttcacactgaagaaaaaggccgaggaaaggaagcgtcgtcaagagaatggtatatttgatgaaa aagactccgagttgaaccttatcatcccagcaatggccaagttagaaacaaggccatacaaaccagctcagtttgaggga tccctgggtcgtctcaccacatctagtgttcacaatccccggcagattatagatgtaggatctgatataccccacacaga cgatgctgagccgcagtgtgtcagcaaagaattacggaggtcacgacagctcctcatggaaatagaaaaggggtacaact tgctgcttgatgttgatgatattgacaagaaaatgttagctctaccagatgatgccaggaaagggagaaaactcatcagc agggtccttccacttcttgaaaagggcctgatggtgctacatgaccctgtgatacttgtgatagaaaactcagatctgga agctctggtcaagttctctgatgaactgaaggagacagtcgtgacgtcgtcgatgtttaacactgagtctatggagaacg ttgacgacgtcatgctaaaattaacatag |
|
Protein
| Protein ID | pfu_aug1.0_3987.1_37763.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3987.1_37763.t1 MGVPPARLMSPYANRAMIHAMGNRMPTPPMGIPRPMGQRPPNHSPYSHPPPPHGPYDGPPPGPHHQSPHSHGSPYGHHMN GLHRPPHPNDPRYNRGRGGRGRMMGGNRGLHHNGESRDYRPPGEHQHRPYPGDHQHRPYRRYYRFNEEEDRKRSIDGYAG LMTQKEKDWIVKIQLIQLQSDNPYLDDYYYTTFTLKKKAEERKRRQENGIFDEKDSELNLIIPAMAKLETRPYKPAQFEG SLGRLTTSSVHNPRQIIDVGSDIPHTDDAEPQCVSKELRRSRQLLMEIEKGYNLLLDVDDIDKKMLALPDDARKGRKLIS RVLPLLEKGLMVLHDPVILVIENSDLEALVKFSDELKETVVTSSMFNTESMENVDDVMLKLT |
|