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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3988.1_59399
Locus scaffold3988.1 : 81906 ... 84365 : +
To GenomeBrowser scaffold3988.1:81906..84365
Genes list of scaffold scaffold3988.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_3988.1_59399.t1 1 1 Astacin 8 80 1.3e-16 60.5 1.1e-20 1.6e-16 60.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_3988.1_59399.t1 gi|157117841|ref|XP_001653062.1| AAEL001330-PA [Aedes aegypti] 4.0e-11

Transcript
Transcript IDpfu_aug1.0_3988.1_59399.t1
Definition-
>pfu_aug1.0_3988.1_59399.t1
atgctcaatttggtgctctattgacacgagagaaactttgacaagtacaagcaaggagttcaaatcgacactgagaacat
gccatacgattatgggtctgtgatgcactacagcgcatacgcttttgccatcgatagaaggaagccaacaattgaagttc
ttcaacctggagtcacgattggtcaacgtacgaaactaagtgataatgatgccaagataatccagattcgttacggctgc
atccccaaaccagctcctcttaccggatcaggggcagtaactggagcaacttctgcgcctcaaattgtacaaacaacacc
aagtatgtttaatgtttaa

Protein
Protein IDpfu_aug1.0_3988.1_59399.t1
Definition-
>pfu_aug1.0_3988.1_59399.t1
MLNLVLYXHERNFDKYKQGVQIDTENMPYDYGSVMHYSAYAFAIDRRKPTIEVLQPGVTIGQRTKLSDNDAKIIQIRYGC
IPKPAPLTGSGAVTGATSAPQIVQTTPSMFNV

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