Gene
| Gene Model ID | pfu_aug1.0_39897.1_19745 |
|---|---|
| Locus | scaffold39897.1 : 1 ... 13052 : - |
| To GenomeBrowser | scaffold39897.1:1..13052 |
| Genes list of scaffold | scaffold39897.1 |
| Synonym | pfu_aug2.0_10.1_00004 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_39897.1_19745.t1 | 2 | 1 | FAM92 | 2 | 101 | 3.4e-33 | 114.8 | 3.0e-30 | 2.3e-26 | 92.5 |
| pfu_aug1.0_39897.1_19745.t1 | 2 | 2 | FAM92 | 100 | 140 | 3.4e-33 | 114.8 | 1.4e-09 | 1.0e-05 | 24.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_39897.1_19745.t1 | gi|351713452|gb|EHB16371.1| | Protein FAM92A1 [Heterocephalus glaber] | 3.0e-22 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_39897.1_19745.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_39897.1_19745.t1 tgaaaatcaggccaaattttgccagaacagggtggctcaagcagaaaaacatatgggtttattctgtgaaacgatgggtt ctataacacgaaaaacagccaggctcagagataaaggtgatattctagccaagcaattgaacgagttcaccaaggaggag gatatcagccactctcttcgggcggggctccaggggtgttctcaaaacctggcagccgtgcaggattatcgtgaggctca gatcaaacgaatggaggctaaagtcgtccgtccgctcatggactacggaaatatatgtaaacaactcaagcatgcgatgg ttgacttcttccaaatccagcttgtgttccatgccaaagctttagaatattatacaaagtgtctagagagtgtaacgatg attgatgaagaaagagatttacaattactctcatgtattggaaaaattgtatttgtatttgaaaagtatgaaaataacgc agct |
|
Protein
| Protein ID | pfu_aug1.0_39897.1_19745.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_39897.1_19745.t1 ENQAKFCQNRVAQAEKHMGLFCETMGSITRKTARLRDKGDILAKQLNEFTKEEDISHSLRAGLQGCSQNLAAVQDYREAQ IKRMEAKVVRPLMDYGNICKQLKHAMVDFFQIQLVFHAKALEYYTKCLESVTMIDEERDLQLLSCIGKIVFVFEKYENNA A |
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