Gene
| Gene Model ID | pfu_aug1.0_4.1_57861 |
|---|---|
| Locus | scaffold4.1 : 47306 ... 71427 : + |
| To GenomeBrowser | scaffold4.1:47306..71427 |
| Genes list of scaffold | scaffold4.1 |
| Synonym | pfu_aug2.0_4576.1_22577 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4.1_57861.t1 | 2 | 1 | DNA_pol_B_2 | 731 | 952 | 6.5e-36 | 123.9 | 2.7e-25 | 3.9e-21 | 75.2 |
| pfu_aug1.0_4.1_57861.t1 | 2 | 2 | DNA_pol_B_2 | 1148 | 1396 | 6.5e-36 | 123.9 | 8.8e-18 | 1.3e-13 | 50.4 |
Transcript
| Transcript ID | pfu_aug1.0_4.1_57861.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4.1_57861.t1 atggaccccgcgcgtcttttattcaaagaaatagaagaagcagaatggggtgctacgtcaactctgaacattgctgacaa tatacttgatgatatccagaatgtaagagtcgtagaacatgtattatatgacgatatagagacaatggaatgggaacaac cctatgacaatgttgccgacactattttggatcaagcgtccaacagcgggtctgctttgcaatctctgagtgatttttat gatatactagaatcgtcctttcacgattacgattcactcggaaaagacgtggacatcatacccatttttgacatatcgga gtatggcaacgtctccctccaagatggtggtgcgctgctgaatggtgtccaagcagaaacccttgtcggtggtggcaaga agaattacgaaataaagctgatgaaagaaaaggaattaaaaaagatgggtgtcaaagacatcaattacgaactaaatttc aaaccgaatatgttccaacaagatagaaaattaagagatgtcttaggtatcttaaaagatgcttttggaaatatgattca aagggtgaaaaaagatctacagccagatgacatcatgagagccgccattcacaacgatgctctcgacacacccatcttta tacccttgaagccgatgcaggaattttcacccgaaatgatgatggatgttatcgtcaacgtcttgaatagccaagaggat atccctttcgattcctcaactcgagttgacatcggggccatcaagtatcctcgtggcggtcatagacataaaatcagcaa catacaacgatcgctgaagaacaaaacatcagtcgttgaaatccaaaacaacgacaatttgtgtctgctgagagccgtca cagtggcctatgcctccacttgtaaacgttctgatgatgaaatacaaagatttaaggaaagtcatcccaccatcgcagag aagcagatgttactggagtacggcatgtgctctaatttatattaccgacgaattaaattaaattatcatggtatacaaga cgacatcacacatcatttggtgtatcggttgaacattgaagggaacaaccccttgacctatcaggtcattccacgacttg aaaatacattcaatgtcaatatttatgtcgtttcttcgaacctagggaattcgttttcttacgtgagttcgagttcagac acggagcgaacaaaactttttgtgtaccacgttagagaagatgatcttgatcattatcacgccatcactaaaatcacagg gtttttcggtcagtcctacttttgcacctcttgtttaaagccttattcacacagagaacatcactcttgtttgacacatt gtaacgtgtgtttgtcgaaccagtgtatcaaagaacgagatacaacatgtccagattgcaatcgcacatgtcggtctgtg acatgttttaatagacacaaaacgatttcggacaagggcagcatgccttgtcaattcttctataaatgtcctgcgtgtca caaaacgttcgaaacgaaaaagttgacacctaaagaccacaaatgtggttactacacgtgtaaatcgtgtcagcaatacg tggcacctgatcatatatgttactcaagatcagtatccgagatggcggtcgaggatcgcaaatacatatttgccgatatc gaggcatcgcagagggacgaaattgttcaatgtaattggggatacgttcctcccagaaataacacgtgttctgagtgtca atatgatcgaatcttttgtcagacgtgtgtcatgtgtaagtattgtttgcgagcagaatgtggtatgggttcgccatgct ctttcaaatactcgccacaaccaagagagcattgtcaagaatgcacatttataagtgataaatgtaaggcgtgtcagaca tgtcagaactgtctgaaatcttcgtgtggtcaaaaacgtcatacagtagtcttagccgtctgtcagacggcttgttctaa atgcgaggataaacccctgaactcccaaagcaagtgcaaatactgtggcagtcgctgtgccatgtgttcaaagagagatg ccaaaactaaacagtttgtgtcgtctccctgcgcacacacttgtggctatcgcgaacttgtttttcgcacattgtacgac ttagggtcctggatctttcacgacaatcacaagggatacactgtcatgtttcataacttgtcttatgacggccagtttct catgcagtatctactttcgcaatcgatgcgaccatctttcgtcatttaccgcggaagtaaaattcaaatgttcaacgtac aaagtttacaaatcagggtcatagattcattcaattttttacccatggccttagccaaattacctaaagcgtttcagctc gacacacttgccaaaggatatttcccacattttttcacgcgtcgagaacatttgaattacgtaggaccctatccgcccgt ccaattctacgctccggatagcatgtccctcgatgacagaagtaaattcttggattggtatcaaaacaaggtcacatccg gggaactatttgattttcaaaaagaaatgatcaagtattgcaagagtgacgtcgacatcttgcgtcgcgcatgcctgaaa tttaaaaacttgttgaatgacgcgaccggaagtgacggaggagttaaagttgacgcatttgctacctgcactatagcttc cctgtgcatggaagttttcaaaaagaaatttctgcgcgaagaatggagagtactcgttggttctcctattgcggacaatg agtctagaaacaatgccactaaacatgttgatgacaaagaggaatggctcaatgctttcaaactgaacggtcaaatgaaa gtctttcatcaaggttgctggaaaaacgcgagcattttcgagcgtcaaaccggactgaaaataaagaagtctttgtttgt ccgatctcccatcgccaggccgccccctaatgggtacgtctcgcaagtcaaattcagcaagaaatcgatacagtggctag aatggctcatgcaccgcgcaagtgtcaaaggtcagatcataaacattcagcacgctcttaacggaaggggagagtacaaa gtgcccggtaccagatactcgttggacgggttcgtagcacctgcagccgatcgccctcaagccatagcttatgaattcaa tggttgtaggtatcacggatgtccaacctgctataaaaacaaagacgatgttctcaatcctaatacgggagcaacggcct ctgaactatttgccctcaccctgatcaaagaagccaaacttcgcgaaatgggattcaaggtcattaaaatctgggaatgt cagtttgattctcaatgccagaaaaatggcaacctccgatcctttatcgaatctttagacctcgaagatcgcttagatcc tcgcgatagtctcatgggtgggcgtacaaacggttcggtcttattcaaaagggccaataccaaatctaaaatcaaatacg ttgactttaccagtttgtacccctttatcaacaagaatgcaaaatatccgctttatcaccctgagatcatcaccggtaat gtcacggacatctcctcctactttggtattgctaaagtcaagattttacccccgcgcggtctgtttcatccggtcttggg ctataagacgggtggaaaattgacatttccgctgtgccgtagctgtgtagagaaacaacagcagaccccttgtcgatgct ccgaagcagatcgttcgtttgtggggacctactgcacgccagaaattgaaaaggcgatcgagaaggggtacaggattctc aaaatttacgagatctaccactggcccgaaactacccagtacgatccgaccaccaagactgggggtctctttgttgagta catcaacatgtttttaaagatcaaacaggaagccagcggtcgtccggaatgggtcaaaacagaggccgatctcgaaaagt acattgaattgtacgaggaaagagagggcatccgtttagacccccaaaacgtcgaattgaacttagggttgaggagtttg gccaaactgctcctaaacagtttttggggtaaatttggccagaggatgaacttgacaaagactcaattcatccatgacac cgaagcccataaactgttcggtcaaatggccgatccaacggtagaactggtcgattttaacatcgtgaacgacgagactc ttatgttatcgaccaaacgaacgtcggaagacgaatgtggtatcaataatccttatcccgtggatggagtggtagttgaa gaccctgccaactcagcttcttgtgaagagagtcaagagaagcagtatgagagcacagtaaggctatcatttaatgggag catagctggaaaatgtctggagccaatgatcaccatagaagtaaatggttattcagcacataatgtgacagctgacttta ctattacatttacagaatatgatgaatgttcaagtaacccgtgccagaacaatgggacgtgtacgaatttgtccaataat tacaattgtagttgcccaactggcttctatggaacacactgtgaaacagcttacgaaaatattaactcgcatcgagcaaa gtcttctaacatactgcgagacaacttattccaggaatggaatcattcagatgtggatcctaaaaaaattctaaggaact ttcggaaaatttga |
|
Protein
| Protein ID | pfu_aug1.0_4.1_57861.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4.1_57861.t1 MDPARLLFKEIEEAEWGATSTLNIADNILDDIQNVRVVEHVLYDDIETMEWEQPYDNVADTILDQASNSGSALQSLSDFY DILESSFHDYDSLGKDVDIIPIFDISEYGNVSLQDGGALLNGVQAETLVGGGKKNYEIKLMKEKELKKMGVKDINYELNF KPNMFQQDRKLRDVLGILKDAFGNMIQRVKKDLQPDDIMRAAIHNDALDTPIFIPLKPMQEFSPEMMMDVIVNVLNSQED IPFDSSTRVDIGAIKYPRGGHRHKISNIQRSLKNKTSVVEIQNNDNLCLLRAVTVAYASTCKRSDDEIQRFKESHPTIAE KQMLLEYGMCSNLYYRRIKLNYHGIQDDITHHLVYRLNIEGNNPLTYQVIPRLENTFNVNIYVVSSNLGNSFSYVSSSSD TERTKLFVYHVREDDLDHYHAITKITGFFGQSYFCTSCLKPYSHREHHSCLTHCNVCLSNQCIKERDTTCPDCNRTCRSV TCFNRHKTISDKGSMPCQFFYKCPACHKTFETKKLTPKDHKCGYYTCKSCQQYVAPDHICYSRSVSEMAVEDRKYIFADI EASQRDEIVQCNWGYVPPRNNTCSECQYDRIFCQTCVMCKYCLRAECGMGSPCSFKYSPQPREHCQECTFISDKCKACQT CQNCLKSSCGQKRHTVVLAVCQTACSKCEDKPLNSQSKCKYCGSRCAMCSKRDAKTKQFVSSPCAHTCGYRELVFRTLYD LGSWIFHDNHKGYTVMFHNLSYDGQFLMQYLLSQSMRPSFVIYRGSKIQMFNVQSLQIRVIDSFNFLPMALAKLPKAFQL DTLAKGYFPHFFTRREHLNYVGPYPPVQFYAPDSMSLDDRSKFLDWYQNKVTSGELFDFQKEMIKYCKSDVDILRRACLK FKNLLNDATGSDGGVKVDAFATCTIASLCMEVFKKKFLREEWRVLVGSPIADNESRNNATKHVDDKEEWLNAFKLNGQMK VFHQGCWKNASIFERQTGLKIKKSLFVRSPIARPPPNGYVSQVKFSKKSIQWLEWLMHRASVKGQIINIQHALNGRGEYK VPGTRYSLDGFVAPAADRPQAIAYEFNGCRYHGCPTCYKNKDDVLNPNTGATASELFALTLIKEAKLREMGFKVIKIWEC QFDSQCQKNGNLRSFIESLDLEDRLDPRDSLMGGRTNGSVLFKRANTKSKIKYVDFTSLYPFINKNAKYPLYHPEIITGN VTDISSYFGIAKVKILPPRGLFHPVLGYKTGGKLTFPLCRSCVEKQQQTPCRCSEADRSFVGTYCTPEIEKAIEKGYRIL KIYEIYHWPETTQYDPTTKTGGLFVEYINMFLKIKQEASGRPEWVKTEADLEKYIELYEEREGIRLDPQNVELNLGLRSL AKLLLNSFWGKFGQRMNLTKTQFIHDTEAHKLFGQMADPTVELVDFNIVNDETLMLSTKRTSEDECGINNPYPVDGVVVE DPANSASCEESQEKQYESTVRLSFNGSIAGKCLEPMITIEVNGYSAHNVTADFTITFTEYDECSSNPCQNNGTCTNLSNN YNCSCPTGFYGTHCETAYENINSHRAKSSNILRDNLFQEWNHSDVDPKKILRNFRKI |
|