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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_400.1_65402
Locus scaffold400.1 : 1 ... 17205 : -
To GenomeBrowser scaffold400.1:1..17205
Genes list of scaffold scaffold400.1
Synonym pfu_aug2.0_1349.1_31629

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_400.1_65402.t1 gi|327287436|ref|XP_003228435.1| PREDICTED: DDB1- and CUL4-associated factor 8 [Anolis carolinensis] 4.0e-21

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
maleGonad 1

Transcript
Transcript IDpfu_aug1.0_400.1_65402.t1
Definition-
>pfu_aug1.0_400.1_65402.t1
atggcagagaaaggaaagcttgagaactgtgtgtttggcggcgaggaggacaaaatcaagaatcaggcagatagttctct
gaatgaatctggaatcgcaatggagaaacagacggacatctcatacgacagcatggtgacgaaaaataaaaacactgatt
tgcggaagagcaccacacagaatgcacaagatacagacaaagacaaatgtatgggcattgagttcaataaagaatctaac
gttacagtgaatattgtgcacgaggaatcgggaatatttgtagataatgataatcttgatgtaacgagtgttgatgctgg
tcaggttagccaagactctgagtctgactccgcattaggattacggaaaaataacagcgatctttcagtggaaggggaaa
aatctccttcgacaggcaagagttgttcagacttagacatcagtgaatgtacgtgtgacacacaaacggacagtggtgta
acttcaggcacaaactctgctagcgattcgtcaaactaccgcaagactttaaaagttttggatgccaaaaatggcatgca
aacagataatgcattaaaatataaaacaaaaaaccaagaaatgacgggaaattatgaggagtcagagtcagatgtcaaag
tattaaacgataacgacaaaaatcatgttcaggtctgtgataatgataaagactctcacgagagcaaagaattacttgcc
gacataaactgtgataaagcagaggaatgtgacattagcgattgtatgcctacttcactcgacacagaggacagcgatcc
tattggtagttacgatgttgccatggcaacggtgagtaattcagaaggtgagcagaattccgagtcaattaaaatcaaga
aaaacatacgcataagaggaaaacgtaaatatcgtataccgcgcattaaatcagacagtgacactgaaagtgataccaca
gaaaatgttgacatgaatacaggtgaaaatctcgagagagaaaacggtcaggacgaattaagtgatgactctgatttttc
ggctgatcattttgacgatattggtgatgaagatgatgatgacaatgaagagtcagaaaagaagaagtcagaggagagta
aaagtgattcagaagaagaagaagaaagcaatagatctactaaatacaaacacacctggaaagctctgtatgatttaagg
agcagggaatatgggagcaataacaggtattatatgtataatgaactacttctggtttgttttgactgtgaaaaatgtat
atttccaatgtcaaccgaaagttctggattggttaagaaatactgtcctcataaactggttgatagcagttccaaggcca
atgttacctgtgcagtttacagctataatgggacagagatcctgggatcctacaatgatgacgatatttactcgttcagt
aatttagactcggacggcgccgagtacatacacaaatatggaggacatcgtaacaatgctacaggtttgtatgagcaagt
tcgggtggttaactattga

Protein
Protein IDpfu_aug1.0_400.1_65402.t1
Definition-
>pfu_aug1.0_400.1_65402.t1
MAEKGKLENCVFGGEEDKIKNQADSSLNESGIAMEKQTDISYDSMVTKNKNTDLRKSTTQNAQDTDKDKCMGIEFNKESN
VTVNIVHEESGIFVDNDNLDVTSVDAGQVSQDSESDSALGLRKNNSDLSVEGEKSPSTGKSCSDLDISECTCDTQTDSGV
TSGTNSASDSSNYRKTLKVLDAKNGMQTDNALKYKTKNQEMTGNYEESESDVKVLNDNDKNHVQVCDNDKDSHESKELLA
DINCDKAEECDISDCMPTSLDTEDSDPIGSYDVAMATVSNSEGEQNSESIKIKKNIRIRGKRKYRIPRIKSDSDTESDTT
ENVDMNTGENLERENGQDELSDDSDFSADHFDDIGDEDDDDNEESEKKKSEESKSDSEEEEESNRSTKYKHTWKALYDLR
SREYGSNNRYYMYNELLLVCFDCEKCIFPMSTESSGLVKKYCPHKLVDSSSKANVTCAVYSYNGTEILGSYNDDDIYSFS
NLDSDGAEYIHKYGGHRNNATGLYEQVRVVNY

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