Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_400.1_65405
Locus scaffold400.1 : 57658 ... 62165 : -
To GenomeBrowser scaffold400.1:57658..62165
Genes list of scaffold scaffold400.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_400.1_65405.t1 2 1 Kazal_1 2 7 6.2e-07 29.3 0.58 4300.0 -2.2
pfu_aug1.0_400.1_65405.t1 2 2 Kazal_1 47 87 6.2e-07 29.3 8.4e-11 6.2e-07 29.3
pfu_aug1.0_400.1_65405.t1 1 1 Kazal_2 53 92 3.2e-07 30.1 9.4e-11 7.0e-07 29.0

Transcript
Transcript IDpfu_aug1.0_400.1_65405.t1
Definition-
>pfu_aug1.0_400.1_65405.t1
atgaagcattttggtgcatgcctaatcatatctggtgataacaacaataatgtctctactagcaccaaatggtcatcttc
tacaacagtgacgtcaccaacaacgaccagggacatcattgtccaggtattctgtgcccataaagatgatactgtctgcc
ctcaaacactggatcctgtctgtgcaacaaattatcaattctataggaacgaatgtgaatttgccaaggctcggtgtaag
gaccatacactttcacttcaagttcttgagaactgtaagaatatagtgccattaaacggatctggttcatga

Protein
Protein IDpfu_aug1.0_400.1_65405.t1
Definition-
>pfu_aug1.0_400.1_65405.t1
MKHFGACLIISGDNNNNVSTSTKWSSSTTVTSPTTTRDIIVQVFCAHKDDTVCPQTLDPVCATNYQFYRNECEFAKARCK
DHTLSLQVLENCKNIVPLNGSGS

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