Gene
| Gene Model ID | pfu_aug1.0_40099.1_26917 |
|---|---|
| Locus | scaffold40099.1 : 1 ... 5465 : - |
| To GenomeBrowser | scaffold40099.1:1..5465 |
| Genes list of scaffold | scaffold40099.1 |
| Synonym | pfu_aug2.0_549.1_30898 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_40099.1_26917.t1 | 1 | 1 | Med11 | 6 | 106 | 9.9e-21 | 73.9 | 4.3e-24 | 1.3e-20 | 73.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_40099.1_26917.t1 | gi|350420514|ref|XP_003492533.1| | PREDICTED: mediator of RNA polymerase II transcription subunit 11 [Bombus impatiens] | 2.0e-28 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_40099.1_26917.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_40099.1_26917.t1 atgtcagcaccggttgacaagttgagggaattggaaacgatagagactgacattgccaatgctgttcagagttctggtta tgcactgcaagagcttgcgaaagaaaaacctgtcatgaagcaagtagaaacacacaccacaagttttatgaagacattag tagaagtagagagaaagcttacaaaacatatcaactacttgacccaagtttcaacaggacagcctcatgagggctcgtca tatgcagctcagaaagatttgaccttggcctatcatcgtatagatcacatcaccagtagtttgaatgaccttggcagact gtctgcagaaccaggtcaacaggtctccaggcaacagatttctaaaagtgacttgttacagatgtcagactga |
|
Protein
| Protein ID | pfu_aug1.0_40099.1_26917.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_40099.1_26917.t1 MSAPVDKLRELETIETDIANAVQSSGYALQELAKEKPVMKQVETHTTSFMKTLVEVERKLTKHINYLTQVSTGQPHEGSS YAAQKDLTLAYHRIDHITSSLNDLGRLSAEPGQQVSRQQISKSDLLQMSD |
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