Gene
| Gene Model ID | pfu_aug1.0_40106.1_34149 |
|---|---|
| Locus | scaffold40106.1 : 594 ... 11533 : + |
| To GenomeBrowser | scaffold40106.1:594..11533 |
| Genes list of scaffold | scaffold40106.1 |
| Synonym | pfu_aug2.0_110.1_00259 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_40106.1_34149.t1 | 2 | 1 | BTB | 116 | 215 | 5.3e-22 | 77.9 | 3.4e-17 | 5.1e-13 | 48.9 |
| pfu_aug1.0_40106.1_34149.t1 | 2 | 2 | BTB | 252 | 291 | 5.3e-22 | 77.9 | 3.9e-10 | 5.8e-06 | 26.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_40106.1_34149.t1 | gi|260837037|ref|XP_002613512.1| | hypothetical protein BRAFLDRAFT_71875 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_40106.1_34149.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_40106.1_34149.t1 atgggagctaattcctcctttcccgagggttcaccgccaggtggcagagtcccaaccttttctcggctatctcacgccta cacagtgtcggacaatgacatcagcgcccgagagaaaaagaaaaaggcgtcgaagctcgcaacattgcggaagaagctca ttcgagctcgcagacatagccgatccatggattatggaaaacctatgagagatctgatatcaacttggactataagagac ataaagagtctacttcaagaatatgacgcactagcggcgctaaaagaggtgtacatcgcggcaaacttggcgcgaccatc agcgagttccttaaagcaggatttttcagacttgttcgatttcaagtactgtacagatgtggatttagtgtacaggggtg cgtgtttccccgctcatagagctttactttccgtaaggagtccgtattttagagctttattatcaaaatacccggcacac ggcgcccaggtgcccgtgaaattaaaaactttgggagtggacgtggcgctgtttgccacagtcttaaggtttctctacac agacattcttagtattgaggagttgagtcctgatcaacaggaagtgctatcgaaactcgcaaatgagttcggaattccga agccgttagaacaggatcttaaaaattcattagacaatgctgaatacagcgacgcggtcttggtgttctcatgcggcggc aactgcagcgacccgatgtcatctgacccggaagtgttttgtaaatccgttcagcacgaggtcagatgtcacaaagctgt gctcgccgcaaggtcatctttctttagaaacttacttctacgtcgtgccaaatccggtgacgaaagcacggaaagaacgt tgaacgtggcgtcaaaaattgtgttagacgaatctgtgataccgcgacgctacgctcgcgtcttgttgaacgctgtttac caagattgtgttgatttatcgctaattttacggggcagcaccagtacgtgtagtctaagtgaggtccaggccatagcgtc ggggaagggacagatgactcttatagatgaagccatggaggtttatcaaatagggcagttcctggatttcccagttctat cacagggtatggtacccatatttactagaatacagttcatagtagtttcctag |
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Protein
| Protein ID | pfu_aug1.0_40106.1_34149.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_40106.1_34149.t1 MGANSSFPEGSPPGGRVPTFSRLSHAYTVSDNDISAREKKKKASKLATLRKKLIRARRHSRSMDYGKPMRDLISTWTIRD IKSLLQEYDALAALKEVYIAANLARPSASSLKQDFSDLFDFKYCTDVDLVYRGACFPAHRALLSVRSPYFRALLSKYPAH GAQVPVKLKTLGVDVALFATVLRFLYTDILSIEELSPDQQEVLSKLANEFGIPKPLEQDLKNSLDNAEYSDAVLVFSCGG NCSDPMSSDPEVFCKSVQHEVRCHKAVLAARSSFFRNLLLRRAKSGDESTERTLNVASKIVLDESVIPRRYARVLLNAVY QDCVDLSLILRGSTSTCSLSEVQAIASGKGQMTLIDEAMEVYQIGQFLDFPVLSQGMVPIFTRIQFIVVS |
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