Gene
| Gene Model ID | pfu_aug1.0_4011.1_16244 |
|---|---|
| Locus | scaffold4011.1 : 1 ... 15000 : + |
| To GenomeBrowser | scaffold4011.1:1..15000 |
| Genes list of scaffold | scaffold4011.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4011.1_16244.t1 | 1 | 1 | BOP1NT | 1 | 81 | 1.9e-20 | 73.7 | 3.0e-24 | 2.2e-20 | 73.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4011.1_16244.t1 | gi|321466691|gb|EFX77685.1| | hypothetical protein DAPPUDRAFT_305412 [Daphnia pulex] | 1.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 8 |
| egg-4cell | 2 |
| 8-16cell | 1 |
| egg-Dshape | 2 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantleEdge | 2 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4011.1_16244.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4011.1_16244.t1 ccatgggtagatttcttcacacatgagaaaatgattcatcccgtcacaaacaggccagaacataaacggagcttcatacc gtctaaatgggaaagactaaaggtaggacagatggtccacgccctgaagatgggctggatgaaaccgacgaagaagaaga cagcagatgaagaagatgaagaggatcaacacaaatactacatgttgtggaaggatgatgaagagaagacccagagatat gttagagtatacaatttgttaaagcaggagttgaccaagaaattaatgacaaactgtaaatgggtgtctagtatgtctgt acactcaggagatgatgtgacctttgttttgttaccaaaatatttacgcagtgaccttgacctagttgattga |
|
Protein
| Protein ID | pfu_aug1.0_4011.1_16244.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4011.1_16244.t1 PWVDFFTHEKMIHPVTNRPEHKRSFIPSKWERLKVGQMVHALKMGWMKPTKKKTADEEDEEDQHKYYMLWKDDEEKTQRY VRVYNLLKQELTKKLMTNCKWVSSMSVHSGDDVTFVLLPKYLRSDLDLVD |
|