Gene
Gene Model ID | pfu_aug1.0_4013.1_37778 |
---|---|
Locus | scaffold4013.1 : 10376 ... 42045 : + |
To GenomeBrowser | scaffold4013.1:10376..42045 |
Genes list of scaffold | scaffold4013.1 |
Synonym | pfu_aug2.0_366.1_20668 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_4013.1_37778.t1 | 2 | 1 | Cohesin_HEAT | 934 | 975 | 2.1e-15 | 56.2 | 1.7e-16 | 6.5e-13 | 48.3 |
pfu_aug1.0_4013.1_37778.t1 | 2 | 2 | Cohesin_HEAT | 991 | 1006 | 2.1e-15 | 56.2 | 0.0067 | 25.0 | 4.9 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_4013.1_37778.t1 | gi|291234474|ref|XP_002737175.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 3 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_4013.1_37778.t1 |
---|---|
Definition | - |
>pfu_aug1.0_4013.1_37778.t1 atgaatggtgaagtgccaagtgttcctattacaacacttgcaggcatacagagtttatcagatgtattatcagaattgcc attacctacccccacccaatcaaaccaaagcttaatttccaatgaggatgtaagatactcagcacgagggttattagcca gtagagaccaaacactcacagacaatcttgtcttagctctagagcagacttcaacagatgacataaaactcagagaagat cttgttggtgctggtaaacttgatggaaatgccccagaattgatcaagtccattctctcacagaatccaggagcgtttaa aggtggagtgagaaagaaaaaagttaaagaagagacaaatggagaatcttatagcaaagcctcagctgcctcctctggag ataatccaaatgttaacaggcattctgaacatcagtcccaccacagcagttcatccatacagtcaacatcaaagttccaa cagtcttttcaaagctttgccaagtcatctactagtgatgataaggaggaaagtaagcataccagtcatgctaaagagag atcaggagatcgatcaaaatctaagagcaaatcatcttcagaacctgtggttttacttgaaccgttacaatttaaacaat cctggatgaaaaccaaggattctccctcttcagagtctcagaaaaagcagaaaccctccggtcctattgtgatgctggaa cctcttgatgaaaagactctgaagtctatacaaagtagtggaacagtaaaagctggacatagaagacggaggatagttga tgatgaagactacttggatgaatgtaatggatcatatagaaaaagacaaaggaatcactatgcagatggttactatgatg atgaatatgacagcgactccaggagcagatcagctacccctgtagattatgtaaagaagaagaaaaaagagaagaggcat cggagaattaatcagaatgctttatctgtggaagaactacttgacagtccaacgtttaaaaagtttagcagctgtatgga aggcatcctggagactgctgaggatatcaactttggttctctagacccaagtaatgatgaaacagagtgcccaccagaaa cattgatctccagaggtgttctctcagacctctgtggtgagactgccaaactaaaaactctcggagttctaaatcaggtg ccagcagataggctagtaaagctccttacagttctacagtggaacatcagagatggcaccaaagtctcacctttaatagg ccaagtggaggatgaggatgatgaagaacagaggttatggagagaggtgaccatggagcgtgtaatgagaagtatggaat ctgctctaactgccctctatatcatgacgtcaccagacatgcctaaacaagtgtacatagaggatgttatagagagaatt atcctctttggaaagttccagctacaaaatactatttttcctgaatttgatcctgtatacaggattgatccaaaagcaaa agatggttaccatggaagccttaaagctaagagagccagagcatctcaagtcaaacacaaatctacaatatcactgtaca acaagatctcagatatgatcagcaacctagctgagcttgtttatgttcaagagctaacagataccaccattttacaggtt tcaacacttggtgtttcaccattctttgttgagaatataagtgagatgcagctaaactctttgaagttggttaccactgt attttctaagtatgaaaagcacagacaactgattttagaagatatttttgcaagcttagccagactaccttcaagcaaaa ggaatctgagaaattataggttgaattctgaggagtctattcagatggtgacggccctagcgttacagctgatccagtgt gttgttatcctgccgtctagtagcttacaggacacaaatatagaggatgaggaatctctacagtcatcaaaacaaaaact aaaaagacaggctgatcatgatgtaacaattgtcacatccttcgagaatgctttgagaacggggcacaattttctcagtg ttttcttgaaaaaatgtacaactaaaggtgaagaagattaccgtccgatgtttgagaactttgtacaggatctattatct accgtcaataaaccagagtggccctcctcagaactgcttcttagtcttctcggaaggattctggtatcccagttcagtaa taaatccaccgatatgtcacagcgtgtagcatcgttagagtacttaggtatcgtagcatcaagattacggagggatgccg tctctagtcaagacaatcaggaaacagttgatgaaatcattgctaagtctgaaatggaggaccagactcaagtgttacag aaggccatgttagactacctggcccatcactgtaagagtgaatcagcttactggtatgcaaggttgttctatattgcaca atggtacagagatgtaaatcttgagttagagagaaccatgaaaggtggaggggatgccgacatggggggtcagatgacca gtgaagtcatagaaaacgcagaaaaaaggaaaaagttcctcttagaaatggcagagctatcctcaaaacctactgcaaac ttcaagccaccctcaaccaagcttgattacgacaatgcatgtcttgctgccagatatttatcctccaagaggccttttgc caagagttttgactactatcttactcagattttacgagtgttatgtgagacagctgtggcagtaagaaccaaagcaatga aatgtttaactgctgttatagaagctgatcctggcattttagcaagggatgatatgaagcaaggtgtacatgccagattt cttgaccagtctacgtctgtgagagaagcagctgttgagttagtaggaagatttatcttaatccgtccagaacttattcc tacttactacgacatgctctcagaaagaatacttgacacaggtataagcgtgcggaagagagtgataaagatcttcaggg atatttgtgtagagcattcagatttccaaaaaattccagaaatctgtgtcaaaatgatcagacgagtcaatgatgaagag ggcataaagaaactggtgaatgaggttttccagacgatgtggtttacaccattgagtaccagagacaaagattctacgaa gttattaacccgagtcatcaatatcacagaagtggtagcagcctgtagagacactggatacgagttttttgagcagttac tagaaaaccttttgaagaaagatgaagatgggaacttcaacaaaagtgctgtgacgtcatgtcgccagatagtggactgc ttggtggaaaatgttctaacattagaagaaaaggctgttggttgtttgttacggtttatggctgagcataaaaatgatcc gacaagtccctctcgggaaagaaaaccaactttactcaggtctttgttcaccactggtttactgtgtaaaaactttgact ttgatgccaaagaattgggagacccaaagtattcagttaaggacagggtgtttgaagttctagtctactttgtgaaccat gacgatgaagctattaaagaaatggctctttcgggattagggtccatggcaatacggcattttgaggtcatgttaggaca agaaatgaagacgatgtatttcaattttcttgaaaaagaaaagagttcattaaaactgaaaatccagtataaaccattat aa |
Protein
Protein ID | pfu_aug1.0_4013.1_37778.t1 |
---|---|
Definition | - |
>pfu_aug1.0_4013.1_37778.t1 MNGEVPSVPITTLAGIQSLSDVLSELPLPTPTQSNQSLISNEDVRYSARGLLASRDQTLTDNLVLALEQTSTDDIKLRED LVGAGKLDGNAPELIKSILSQNPGAFKGGVRKKKVKEETNGESYSKASAASSGDNPNVNRHSEHQSHHSSSSIQSTSKFQ QSFQSFAKSSTSDDKEESKHTSHAKERSGDRSKSKSKSSSEPVVLLEPLQFKQSWMKTKDSPSSESQKKQKPSGPIVMLE PLDEKTLKSIQSSGTVKAGHRRRRIVDDEDYLDECNGSYRKRQRNHYADGYYDDEYDSDSRSRSATPVDYVKKKKKEKRH RRINQNALSVEELLDSPTFKKFSSCMEGILETAEDINFGSLDPSNDETECPPETLISRGVLSDLCGETAKLKTLGVLNQV PADRLVKLLTVLQWNIRDGTKVSPLIGQVEDEDDEEQRLWREVTMERVMRSMESALTALYIMTSPDMPKQVYIEDVIERI ILFGKFQLQNTIFPEFDPVYRIDPKAKDGYHGSLKAKRARASQVKHKSTISLYNKISDMISNLAELVYVQELTDTTILQV STLGVSPFFVENISEMQLNSLKLVTTVFSKYEKHRQLILEDIFASLARLPSSKRNLRNYRLNSEESIQMVTALALQLIQC VVILPSSSLQDTNIEDEESLQSSKQKLKRQADHDVTIVTSFENALRTGHNFLSVFLKKCTTKGEEDYRPMFENFVQDLLS TVNKPEWPSSELLLSLLGRILVSQFSNKSTDMSQRVASLEYLGIVASRLRRDAVSSQDNQETVDEIIAKSEMEDQTQVLQ KAMLDYLAHHCKSESAYWYARLFYIAQWYRDVNLELERTMKGGGDADMGGQMTSEVIENAEKRKKFLLEMAELSSKPTAN FKPPSTKLDYDNACLAARYLSSKRPFAKSFDYYLTQILRVLCETAVAVRTKAMKCLTAVIEADPGILARDDMKQGVHARF LDQSTSVREAAVELVGRFILIRPELIPTYYDMLSERILDTGISVRKRVIKIFRDICVEHSDFQKIPEICVKMIRRVNDEE GIKKLVNEVFQTMWFTPLSTRDKDSTKLLTRVINITEVVAACRDTGYEFFEQLLENLLKKDEDGNFNKSAVTSCRQIVDC LVENVLTLEEKAVGCLLRFMAEHKNDPTSPSRERKPTLLRSLFTTGLLCKNFDFDAKELGDPKYSVKDRVFEVLVYFVNH DDEAIKEMALSGLGSMAIRHFEVMLGQEMKTMYFNFLEKEKSSLKLKIQYKPL |