Gene
| Gene Model ID | pfu_aug1.0_4013.1_37778 |
|---|---|
| Locus | scaffold4013.1 : 10376 ... 42045 : + |
| To GenomeBrowser | scaffold4013.1:10376..42045 |
| Genes list of scaffold | scaffold4013.1 |
| Synonym | pfu_aug2.0_366.1_20668 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4013.1_37778.t1 | 2 | 1 | Cohesin_HEAT | 934 | 975 | 2.1e-15 | 56.2 | 1.7e-16 | 6.5e-13 | 48.3 |
| pfu_aug1.0_4013.1_37778.t1 | 2 | 2 | Cohesin_HEAT | 991 | 1006 | 2.1e-15 | 56.2 | 0.0067 | 25.0 | 4.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4013.1_37778.t1 | gi|291234474|ref|XP_002737175.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4013.1_37778.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4013.1_37778.t1 atgaatggtgaagtgccaagtgttcctattacaacacttgcaggcatacagagtttatcagatgtattatcagaattgcc attacctacccccacccaatcaaaccaaagcttaatttccaatgaggatgtaagatactcagcacgagggttattagcca gtagagaccaaacactcacagacaatcttgtcttagctctagagcagacttcaacagatgacataaaactcagagaagat cttgttggtgctggtaaacttgatggaaatgccccagaattgatcaagtccattctctcacagaatccaggagcgtttaa aggtggagtgagaaagaaaaaagttaaagaagagacaaatggagaatcttatagcaaagcctcagctgcctcctctggag ataatccaaatgttaacaggcattctgaacatcagtcccaccacagcagttcatccatacagtcaacatcaaagttccaa cagtcttttcaaagctttgccaagtcatctactagtgatgataaggaggaaagtaagcataccagtcatgctaaagagag atcaggagatcgatcaaaatctaagagcaaatcatcttcagaacctgtggttttacttgaaccgttacaatttaaacaat cctggatgaaaaccaaggattctccctcttcagagtctcagaaaaagcagaaaccctccggtcctattgtgatgctggaa cctcttgatgaaaagactctgaagtctatacaaagtagtggaacagtaaaagctggacatagaagacggaggatagttga tgatgaagactacttggatgaatgtaatggatcatatagaaaaagacaaaggaatcactatgcagatggttactatgatg atgaatatgacagcgactccaggagcagatcagctacccctgtagattatgtaaagaagaagaaaaaagagaagaggcat cggagaattaatcagaatgctttatctgtggaagaactacttgacagtccaacgtttaaaaagtttagcagctgtatgga aggcatcctggagactgctgaggatatcaactttggttctctagacccaagtaatgatgaaacagagtgcccaccagaaa cattgatctccagaggtgttctctcagacctctgtggtgagactgccaaactaaaaactctcggagttctaaatcaggtg ccagcagataggctagtaaagctccttacagttctacagtggaacatcagagatggcaccaaagtctcacctttaatagg ccaagtggaggatgaggatgatgaagaacagaggttatggagagaggtgaccatggagcgtgtaatgagaagtatggaat ctgctctaactgccctctatatcatgacgtcaccagacatgcctaaacaagtgtacatagaggatgttatagagagaatt atcctctttggaaagttccagctacaaaatactatttttcctgaatttgatcctgtatacaggattgatccaaaagcaaa agatggttaccatggaagccttaaagctaagagagccagagcatctcaagtcaaacacaaatctacaatatcactgtaca acaagatctcagatatgatcagcaacctagctgagcttgtttatgttcaagagctaacagataccaccattttacaggtt tcaacacttggtgtttcaccattctttgttgagaatataagtgagatgcagctaaactctttgaagttggttaccactgt attttctaagtatgaaaagcacagacaactgattttagaagatatttttgcaagcttagccagactaccttcaagcaaaa ggaatctgagaaattataggttgaattctgaggagtctattcagatggtgacggccctagcgttacagctgatccagtgt gttgttatcctgccgtctagtagcttacaggacacaaatatagaggatgaggaatctctacagtcatcaaaacaaaaact aaaaagacaggctgatcatgatgtaacaattgtcacatccttcgagaatgctttgagaacggggcacaattttctcagtg ttttcttgaaaaaatgtacaactaaaggtgaagaagattaccgtccgatgtttgagaactttgtacaggatctattatct accgtcaataaaccagagtggccctcctcagaactgcttcttagtcttctcggaaggattctggtatcccagttcagtaa taaatccaccgatatgtcacagcgtgtagcatcgttagagtacttaggtatcgtagcatcaagattacggagggatgccg tctctagtcaagacaatcaggaaacagttgatgaaatcattgctaagtctgaaatggaggaccagactcaagtgttacag aaggccatgttagactacctggcccatcactgtaagagtgaatcagcttactggtatgcaaggttgttctatattgcaca atggtacagagatgtaaatcttgagttagagagaaccatgaaaggtggaggggatgccgacatggggggtcagatgacca gtgaagtcatagaaaacgcagaaaaaaggaaaaagttcctcttagaaatggcagagctatcctcaaaacctactgcaaac ttcaagccaccctcaaccaagcttgattacgacaatgcatgtcttgctgccagatatttatcctccaagaggccttttgc caagagttttgactactatcttactcagattttacgagtgttatgtgagacagctgtggcagtaagaaccaaagcaatga aatgtttaactgctgttatagaagctgatcctggcattttagcaagggatgatatgaagcaaggtgtacatgccagattt cttgaccagtctacgtctgtgagagaagcagctgttgagttagtaggaagatttatcttaatccgtccagaacttattcc tacttactacgacatgctctcagaaagaatacttgacacaggtataagcgtgcggaagagagtgataaagatcttcaggg atatttgtgtagagcattcagatttccaaaaaattccagaaatctgtgtcaaaatgatcagacgagtcaatgatgaagag ggcataaagaaactggtgaatgaggttttccagacgatgtggtttacaccattgagtaccagagacaaagattctacgaa gttattaacccgagtcatcaatatcacagaagtggtagcagcctgtagagacactggatacgagttttttgagcagttac tagaaaaccttttgaagaaagatgaagatgggaacttcaacaaaagtgctgtgacgtcatgtcgccagatagtggactgc ttggtggaaaatgttctaacattagaagaaaaggctgttggttgtttgttacggtttatggctgagcataaaaatgatcc gacaagtccctctcgggaaagaaaaccaactttactcaggtctttgttcaccactggtttactgtgtaaaaactttgact ttgatgccaaagaattgggagacccaaagtattcagttaaggacagggtgtttgaagttctagtctactttgtgaaccat gacgatgaagctattaaagaaatggctctttcgggattagggtccatggcaatacggcattttgaggtcatgttaggaca agaaatgaagacgatgtatttcaattttcttgaaaaagaaaagagttcattaaaactgaaaatccagtataaaccattat aa |
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Protein
| Protein ID | pfu_aug1.0_4013.1_37778.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4013.1_37778.t1 MNGEVPSVPITTLAGIQSLSDVLSELPLPTPTQSNQSLISNEDVRYSARGLLASRDQTLTDNLVLALEQTSTDDIKLRED LVGAGKLDGNAPELIKSILSQNPGAFKGGVRKKKVKEETNGESYSKASAASSGDNPNVNRHSEHQSHHSSSSIQSTSKFQ QSFQSFAKSSTSDDKEESKHTSHAKERSGDRSKSKSKSSSEPVVLLEPLQFKQSWMKTKDSPSSESQKKQKPSGPIVMLE PLDEKTLKSIQSSGTVKAGHRRRRIVDDEDYLDECNGSYRKRQRNHYADGYYDDEYDSDSRSRSATPVDYVKKKKKEKRH RRINQNALSVEELLDSPTFKKFSSCMEGILETAEDINFGSLDPSNDETECPPETLISRGVLSDLCGETAKLKTLGVLNQV PADRLVKLLTVLQWNIRDGTKVSPLIGQVEDEDDEEQRLWREVTMERVMRSMESALTALYIMTSPDMPKQVYIEDVIERI ILFGKFQLQNTIFPEFDPVYRIDPKAKDGYHGSLKAKRARASQVKHKSTISLYNKISDMISNLAELVYVQELTDTTILQV STLGVSPFFVENISEMQLNSLKLVTTVFSKYEKHRQLILEDIFASLARLPSSKRNLRNYRLNSEESIQMVTALALQLIQC VVILPSSSLQDTNIEDEESLQSSKQKLKRQADHDVTIVTSFENALRTGHNFLSVFLKKCTTKGEEDYRPMFENFVQDLLS TVNKPEWPSSELLLSLLGRILVSQFSNKSTDMSQRVASLEYLGIVASRLRRDAVSSQDNQETVDEIIAKSEMEDQTQVLQ KAMLDYLAHHCKSESAYWYARLFYIAQWYRDVNLELERTMKGGGDADMGGQMTSEVIENAEKRKKFLLEMAELSSKPTAN FKPPSTKLDYDNACLAARYLSSKRPFAKSFDYYLTQILRVLCETAVAVRTKAMKCLTAVIEADPGILARDDMKQGVHARF LDQSTSVREAAVELVGRFILIRPELIPTYYDMLSERILDTGISVRKRVIKIFRDICVEHSDFQKIPEICVKMIRRVNDEE GIKKLVNEVFQTMWFTPLSTRDKDSTKLLTRVINITEVVAACRDTGYEFFEQLLENLLKKDEDGNFNKSAVTSCRQIVDC LVENVLTLEEKAVGCLLRFMAEHKNDPTSPSRERKPTLLRSLFTTGLLCKNFDFDAKELGDPKYSVKDRVFEVLVYFVNH DDEAIKEMALSGLGSMAIRHFEVMLGQEMKTMYFNFLEKEKSSLKLKIQYKPL |
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