Gene
| Gene Model ID | pfu_aug1.0_40225.1_19762 |
|---|---|
| Locus | scaffold40225.1 : 3759 ... 5402 : + |
| To GenomeBrowser | scaffold40225.1:3759..5402 |
| Genes list of scaffold | scaffold40225.1 |
| Synonym | pfu_aug2.0_1321.1_04961 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_40225.1_19762.t1 | 2 | 1 | EF-hand_7 | 59 | 71 | 1.0e-08 | 35.1 | 0.6 | 1800.0 | -0.9 |
| pfu_aug1.0_40225.1_19762.t1 | 2 | 2 | EF-hand_7 | 75 | 159 | 1.0e-08 | 35.1 | 8.4e-12 | 2.5e-08 | 33.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_40225.1_19762.t1 | gi|115840520|ref|XP_001194225.1| | 6.0e-29 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| mantleEdge | 2 |
Transcript
| Transcript ID | pfu_aug1.0_40225.1_19762.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_40225.1_19762.t1 atgagggcattagttgttctgttgatagcgatgtgtatttcgtgttgccatggacacggtgaccatggtcacaattctgg cccaccacaggaacatgtacccgcagatcaattcaacttccacgatcctaaaatcacacaagatgaagaacatatcaaag aacatttaaaggaccaaattaacaccaacagacaaatgagtccagaggaaatggaatttcattatttcaggttacacgat gctaacaacgacaccaagttagatggaatagaacttctcgccgctttgaaccatatgcagcacatgtttaaaatccagcc tcacgagaaaattggtaaaacagagtctcaaattcaattgttagaaaaacagaggtcggaaggagctctccgttacttca ctgatataatcgacaaagttttgataaccgatgacatgaacagagacgggtatgtttcatatccagaatttatggccgcc agacggcgtgactatgctgcttatcaacaacagatggcgcaataccagcagcaacaacaaatggcaatgcaagcacaaca gcaacaattccaacagtggcaacaatatcagcaatggcaacagcaacaggcacaacagggcaacacgcaaactggacagc aggggcaaccaaatgtacaacaatttcagcaacccccagcaccgggggcacctgctaagtccagctaa |
|
Protein
| Protein ID | pfu_aug1.0_40225.1_19762.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_40225.1_19762.t1 MRALVVLLIAMCISCCHGHGDHGHNSGPPQEHVPADQFNFHDPKITQDEEHIKEHLKDQINTNRQMSPEEMEFHYFRLHD ANNDTKLDGIELLAALNHMQHMFKIQPHEKIGKTESQIQLLEKQRSEGALRYFTDIIDKVLITDDMNRDGYVSYPEFMAA RRRDYAAYQQQMAQYQQQQQMAMQAQQQQFQQWQQYQQWQQQQAQQGNTQTGQQGQPNVQQFQQPPAPGAPAKSS |
|