Gene
| Gene Model ID | pfu_aug1.0_4024.1_23468 |
|---|---|
| Locus | scaffold4024.1 : 8586 ... 16759 : + |
| To GenomeBrowser | scaffold4024.1:8586..16759 |
| Genes list of scaffold | scaffold4024.1 |
| Synonym | pfu_aug2.0_82.1_06892 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4024.1_23468.t1 | 2 | 1 | Cyto_heme_lyase | 8 | 174 | 0.0 | 217.7 | 4.2039e-45 | 5.70006e-41 | 140.8 |
| pfu_aug1.0_4024.1_23468.t1 | 2 | 2 | Cyto_heme_lyase | 175 | 233 | 0.0 | 217.7 | 1.9e-27 | 2.8e-23 | 82.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4024.1_23468.t1 | gi|321470923|gb|EFX81897.1| | hypothetical protein DAPPUDRAFT_302793 [Daphnia pulex] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 2 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4024.1_23468.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4024.1_23468.t1 atggggaattcaaattccaatgtagcagaaacaagagcagccacctcgtctcaagggccatcagagtgtcccatgcacca aggaaaggtaccagctaagtctgagaaccttggcaaggcaacagctaattaccctagcgagtgtccaatgcaccagaaaa acacctcaactcagcagtatcggagtgaatgccctatgaaccaaaccagaggggaagataatgcacttattgatgaaatt gatccaagaaacatgatgcctcctccaaatcagcgaccctctccagatcagcctttctctttagacacgggtcgtgtggt gtcaaacatacccaaagcaggcacggaggaaaattgggtatatccctcacaacaaatgttctggaatgccatgcttagaa aaggttggcgatggaagaaagatgacatagaacagaaagacatggcagacattatcaacattcataatgccaataatgaa caagcttggattgaagttctgaaatgggaggcattacatgctcaatattcgttaccttttgatcgtcatgattgggtggt agatcgctgtgggaaggaggttagatatatcatagactattacgacggaggagatgtgaatcctgaaaattacgagtttt cggcactcgatgtgagacccgcattcgattctttcggagcagcgtgggataggtcaagaatagctgtgcgcagatggaga tacgaactcatggacaaaatttctttcgggaaagctgcagaaaccatagtggataacgcgggtagtgataaatctgttaa cactccagcctcctcagtcagctga |
|
Protein
| Protein ID | pfu_aug1.0_4024.1_23468.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4024.1_23468.t1 MGNSNSNVAETRAATSSQGPSECPMHQGKVPAKSENLGKATANYPSECPMHQKNTSTQQYRSECPMNQTRGEDNALIDEI DPRNMMPPPNQRPSPDQPFSLDTGRVVSNIPKAGTEENWVYPSQQMFWNAMLRKGWRWKKDDIEQKDMADIINIHNANNE QAWIEVLKWEALHAQYSLPFDRHDWVVDRCGKEVRYIIDYYDGGDVNPENYEFSALDVRPAFDSFGAAWDRSRIAVRRWR YELMDKISFGKAAETIVDNAGSDKSVNTPASSVS |
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