Gene
| Gene Model ID | pfu_aug1.0_4032.1_44841 |
|---|---|
| Locus | scaffold4032.1 : 222 ... 3425 : - |
| To GenomeBrowser | scaffold4032.1:222..3425 |
| Genes list of scaffold | scaffold4032.1 |
| Synonym | pfu_aug2.0_812.1_07914 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4032.1_44841.t1 | 11 | 1 | LRR_1 | 63 | 82 | 6.7e-16 | 55.8 | 5.8e-05 | 0.14 | 12.2 |
| pfu_aug1.0_4032.1_44841.t1 | 6 | 1 | LRR_8 | 65 | 104 | 1.7e-35 | 120.5 | 1.6e-09 | 3.9e-06 | 26.5 |
| pfu_aug1.0_4032.1_44841.t1 | 7 | 1 | LRR_4 | 65 | 98 | 2.4e-20 | 71.6 | 0.0001 | 0.25 | 10.9 |
| pfu_aug1.0_4032.1_44841.t1 | 11 | 2 | LRR_1 | 86 | 103 | 6.7e-16 | 55.8 | 0.01 | 25.0 | 5.4 |
| pfu_aug1.0_4032.1_44841.t1 | 6 | 2 | LRR_8 | 109 | 153 | 1.7e-35 | 120.5 | 1.7e-07 | 0.00041 | 20.0 |
| pfu_aug1.0_4032.1_44841.t1 | 7 | 2 | LRR_4 | 111 | 146 | 2.4e-20 | 71.6 | 6.9e-08 | 0.00017 | 21.1 |
| pfu_aug1.0_4032.1_44841.t1 | 11 | 3 | LRR_1 | 111 | 127 | 6.7e-16 | 55.8 | 0.064 | 160.0 | 2.9 |
| pfu_aug1.0_4032.1_44841.t1 | 11 | 4 | LRR_1 | 131 | 152 | 6.7e-16 | 55.8 | 0.0016 | 4.0 | 7.8 |
| pfu_aug1.0_4032.1_44841.t1 | 6 | 3 | LRR_8 | 179 | 235 | 1.7e-35 | 120.5 | 6.4e-08 | 0.00016 | 21.3 |
| pfu_aug1.0_4032.1_44841.t1 | 7 | 3 | LRR_4 | 183 | 216 | 2.4e-20 | 71.6 | 0.017 | 43.0 | 3.8 |
| pfu_aug1.0_4032.1_44841.t1 | 11 | 5 | LRR_1 | 187 | 201 | 6.7e-16 | 55.8 | 0.28 | 690.0 | 1.0 |
| pfu_aug1.0_4032.1_44841.t1 | 11 | 6 | LRR_1 | 226 | 249 | 6.7e-16 | 55.8 | 0.02 | 49.0 | 4.5 |
| pfu_aug1.0_4032.1_44841.t1 | 6 | 4 | LRR_8 | 229 | 286 | 1.7e-35 | 120.5 | 2.6e-05 | 0.064 | 13.0 |
| pfu_aug1.0_4032.1_44841.t1 | 7 | 4 | LRR_4 | 257 | 289 | 2.4e-20 | 71.6 | 0.00031 | 0.77 | 9.4 |
| pfu_aug1.0_4032.1_44841.t1 | 11 | 7 | LRR_1 | 278 | 295 | 6.7e-16 | 55.8 | 0.09 | 220.0 | 2.5 |
| pfu_aug1.0_4032.1_44841.t1 | 6 | 5 | LRR_8 | 311 | 359 | 1.7e-35 | 120.5 | 6.2e-09 | 1.5e-05 | 24.6 |
| pfu_aug1.0_4032.1_44841.t1 | 7 | 5 | LRR_4 | 313 | 338 | 2.4e-20 | 71.6 | 0.0064 | 16.0 | 5.2 |
| pfu_aug1.0_4032.1_44841.t1 | 11 | 8 | LRR_1 | 325 | 344 | 6.7e-16 | 55.8 | 0.15 | 360.0 | 1.8 |
| pfu_aug1.0_4032.1_44841.t1 | 7 | 6 | LRR_4 | 329 | 367 | 2.4e-20 | 71.6 | 1.6e-06 | 0.004 | 16.7 |
| pfu_aug1.0_4032.1_44841.t1 | 11 | 9 | LRR_1 | 349 | 369 | 6.7e-16 | 55.8 | 5.8e-05 | 0.14 | 12.2 |
| pfu_aug1.0_4032.1_44841.t1 | 6 | 6 | LRR_8 | 359 | 406 | 1.7e-35 | 120.5 | 1.5e-09 | 3.8e-06 | 26.5 |
| pfu_aug1.0_4032.1_44841.t1 | 7 | 7 | LRR_4 | 373 | 407 | 2.4e-20 | 71.6 | 3.4e-08 | 8.3e-05 | 22.1 |
| pfu_aug1.0_4032.1_44841.t1 | 11 | 10 | LRR_1 | 373 | 392 | 6.7e-16 | 55.8 | 0.0085 | 21.0 | 5.6 |
| pfu_aug1.0_4032.1_44841.t1 | 11 | 11 | LRR_1 | 395 | 406 | 6.7e-16 | 55.8 | 0.025 | 63.0 | 4.2 |
Transcript
| Transcript ID | pfu_aug1.0_4032.1_44841.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4032.1_44841.t1 atggaaatggctgttttgcatatatttacagtattggtgtgcatttgtaccaatacggtcaaatctgactggccgtgcct gtttgcaaagccatgtacatgtgactatgtcagaagaggggtagattgtacaaacaatgggctaaatggaattccatctt atattaactacattgatggaccttggcacatggacttcagtaataataatcttaccacattaccaaagagagcatttgga aatatgacagtatcatccctgatattatcaaacaataagcttcaggcaatcgaagacggtgcgctggaaggaagtgagga ttccatatattcgatttatctggacggaaattcgctggaactggtaccaaaagaagtaggaaaactacaaaaactgaccg agatctatctcgatcgaaatcctttgaaaacattagacgaagtggttttcaaaaacatatcagacaaactcagcacgatt gtgtttggatcacaagacatgacagaatggccaaatgcagtaagtctgttacataatctgtacgatatgacaataaaaaa cactgcgtttgaaactattccagacgacgcattttcgtcattgaagaacattttcgatcttaccttaacatcaacgagcg tacgagcactcccaacatcactgcagcatacaagactattcaaacttactctaaatggcaataaaaatctacgtgaaaat ggatttcctccagctgcctttaaaaaccagactgaattccgtcaattttacatcaacgatggtgcactggaaacgcttcc tccgatatttgcggagatgcccgtgcttgctgtattcgatttgacaaatactcctctgaggtacattaatgacagcgtct tcccgaagaacttcagtaacatatttttcgaattcagcagcaagcattccttttttactggcatcccgccaattttgtca aaaacctcatctctttcaaacatctttttgaacaataacacgatccagtacataaatgatacagacttcacaggaaacaa ccagttgtttgagcttgatctttcaggaaatcccataactgaagtatccattgacgcattcaagcataactctggcttgt acgaacttcatctcgacaacacagaactaacaactatacctaaagcaatacagaacccaaacaaactcagagaactccat ttatctaacaccaagatagcatgtacctgtcagaacttaggatggatgaaatattggaccaagagaacagaaaactttga aatctacgggaactgttacaatagtgatatgactttttcagattacttgaaaaacgagattcccaaatgttga |
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Protein
| Protein ID | pfu_aug1.0_4032.1_44841.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4032.1_44841.t1 MEMAVLHIFTVLVCICTNTVKSDWPCLFAKPCTCDYVRRGVDCTNNGLNGIPSYINYIDGPWHMDFSNNNLTTLPKRAFG NMTVSSLILSNNKLQAIEDGALEGSEDSIYSIYLDGNSLELVPKEVGKLQKLTEIYLDRNPLKTLDEVVFKNISDKLSTI VFGSQDMTEWPNAVSLLHNLYDMTIKNTAFETIPDDAFSSLKNIFDLTLTSTSVRALPTSLQHTRLFKLTLNGNKNLREN GFPPAAFKNQTEFRQFYINDGALETLPPIFAEMPVLAVFDLTNTPLRYINDSVFPKNFSNIFFEFSSKHSFFTGIPPILS KTSSLSNIFLNNNTIQYINDTDFTGNNQLFELDLSGNPITEVSIDAFKHNSGLYELHLDNTELTTIPKAIQNPNKLRELH LSNTKIACTCQNLGWMKYWTKRTENFEIYGNCYNSDMTFSDYLKNEIPKC |
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