Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4036.1_52169
Locus scaffold4036.1 : 31371 ... 37195 : -
To GenomeBrowser scaffold4036.1:31371..37195
Genes list of scaffold scaffold4036.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_4036.1_52169.t1 1 1 Inositol_P 1 61 2.4e-16 59.8 1.7e-20 2.5e-16 59.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_4036.1_52169.t1 gi|324520895|gb|ADY47737.1| 3.0e-16

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_4036.1_52169.t1
Definition-
>pfu_aug1.0_4036.1_52169.t1
atgattgctagcggaagcggtgacgcctatgtggagtatggtattcatatatgggatatagcagccgcaggaataatact
ggaggaagcagggggctgtctgatagatcctgcaggtggtcctgtagattatcagagtcgccgtgtgttagccggatgta
cagaaaccgtagctcagcaactctcatccatattgacacatttagaaatggagagggactga

Protein
Protein IDpfu_aug1.0_4036.1_52169.t1
Definition-
>pfu_aug1.0_4036.1_52169.t1
MIASGSGDAYVEYGIHIWDIAAAGIILEEAGGCLIDPAGGPVDYQSRRVLAGCTETVAQQLSSILTHLEMERD

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