Gene
| Gene Model ID | pfu_aug1.0_4036.1_52170 |
|---|---|
| Locus | scaffold4036.1 : 41096 ... 59892 : + |
| To GenomeBrowser | scaffold4036.1:41096..59892 |
| Genes list of scaffold | scaffold4036.1 |
| Synonym | pfu_aug2.0_5914.1_16154 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4036.1_52170.t1 | 1 | 1 | BOP1NT | 119 | 346 | 0.0 | 265.4 | 0.0 | 0.0 | 265.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4036.1_52170.t1 | gi|118150448|ref|NP_001071203.1| | ribosome biogenesis protein bop1 [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_4036.1_52170.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4036.1_52170.t1 atgagaaaacaatcaaaaacctccggagatgaggaaagtagtaatgaagaaacgaagaatacagtagatgattatgaaga cgatgatgatgatgaagaggatgatgaaaatgaagaagaaagtatcgatgaagatgaagatcaaaggaaagacattcaaa agttagaggaggatgaaactttaaatgatgataaagatcatgacatagttatagaaaatatcaaatcaatgaacgtaaag tcagtgccaaaaaagcaggaggggataactctgtcagtgccggatgagtacgactatgattcttcagatgaggaggatat ccgtaacacagttggaaacattccgttagaatggtacagggactacgctcacatcggctacgacatagagggtcggaaac tgatcaaacctaagaaaaagaggacggtaacagacaaacttaccgggcagaaaatactactgagtgaaaaagacctcaac ctcatcaaaaatatacaatcacaccaactctatgacaaccaacaggaaacttacgagccatgggtagatttcttcacaca tgagaaaatgattcatcccgtcacaaacaggccagaacataaacggagcttcataccgtctaaatgggaaagacttaagg taggacagatggtccacgccctgaagatgggctggatgaaaccgacgaagaagaagacagaagatgaagaagacgaggaa gataaacacaaatactacatgttgtggaaggatgatgaagagaagtctgagacaaagaggtacaggtcccacataccagc acccaaaatggcgttaccggggcacgaggaatcatataaccctccaccggagtatctacccactaaggaagaggaacaac aatggctcgatgctgacccagaggatcgtaaaagaaactttctacctcagaaatactcgagcctgcgtctggtaacggct tataaacgattcatcaacgagagatttgagagatgtctcgacttgtatttatgtcctagacaacagaggataaagatgtt taaaaattgtatgtaa |
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Protein
| Protein ID | pfu_aug1.0_4036.1_52170.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4036.1_52170.t1 MRKQSKTSGDEESSNEETKNTVDDYEDDDDDEEDDENEEESIDEDEDQRKDIQKLEEDETLNDDKDHDIVIENIKSMNVK SVPKKQEGITLSVPDEYDYDSSDEEDIRNTVGNIPLEWYRDYAHIGYDIEGRKLIKPKKKRTVTDKLTGQKILLSEKDLN LIKNIQSHQLYDNQQETYEPWVDFFTHEKMIHPVTNRPEHKRSFIPSKWERLKVGQMVHALKMGWMKPTKKKTEDEEDEE DKHKYYMLWKDDEEKSETKRYRSHIPAPKMALPGHEESYNPPPEYLPTKEEEQQWLDADPEDRKRNFLPQKYSSLRLVTA YKRFINERFERCLDLYLCPRQQRIKMFKNCM |
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