Gene
| Gene Model ID | pfu_aug1.0_4036.1_52171 |
|---|---|
| Locus | scaffold4036.1 : 69585 ... 75965 : - |
| To GenomeBrowser | scaffold4036.1:69585..75965 |
| Genes list of scaffold | scaffold4036.1 |
| Synonym | pfu_aug2.0_380.1_00677 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4036.1_52171.t1 | 1 | 1 | Helitron_like_N | 193 | 347 | 8.6e-26 | 90.7 | 9.4e-29 | 1.2e-25 | 90.3 |
| pfu_aug1.0_4036.1_52171.t1 | 1 | 1 | PIF1 | 851 | 1182 | 1.5e-29 | 103.1 | 1.4e-32 | 1.8e-29 | 102.8 |
| pfu_aug1.0_4036.1_52171.t1 | 1 | 1 | AAA_30 | 851 | 1064 | 9.5e-14 | 51.4 | 1.8e-16 | 2.2e-13 | 50.2 |
| pfu_aug1.0_4036.1_52171.t1 | 1 | 1 | AAA_19 | 876 | 937 | 4.1e-06 | 26.4 | 7.6e-09 | 9.3e-06 | 25.3 |
Transcript
| Transcript ID | pfu_aug1.0_4036.1_52171.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4036.1_52171.t1 atgtctggaagtgacttgtacaagaactctggtattcagattgatgaatcatgggaacaaagtgtttcaaatgatagtag agatattgtaagggagtttgtatccaatgaagcaaatggaacaatttctgatgtttctaatgatgatacacaaagaacgg attcagagaaaagtacaacaattgacacaacaggatatgaatctgataattacagtgaagttgatagcactgaaaatgta acaggaaatgccgacacattgttggaagatgaaagtttgaatactgataaatcctatacatttgctcctggagagggaca acatccattaagcctttacactgatcatgacgcagagtatttgtcttttccatccatattttgtggacaaaggagaccaa ataataaagaaagattagtcccagttcattactctgatattgcaaaatgggaactaagaagtcaagatcgaagagctgca cagtcagtaccaaacatatttttcaagctgaagaaaattcagttaaaacaaataagtgacaaagtgcatttagctgtgag aagaataaaaacaaaggggcaaaaaatcactgctgcacaagcccgagatcaatcaacacttgataaaattgtacgtttag atgaaggatattacatatttagacagttacgcaattctcctgcctatttagcatccaaaaagaaagatgtttttgcgatg atcagacaactaggtttacccacatggtttatgtctttgtcctcagcagacacaagatggccctttttattgaaatctct agccaaacttgatggtaaaatactatcagatgatgaagtcagtaatttatcatggcaagagagaagcacattagttcaaa aggatcctgtttcttgttctcgcatatttaatgaccgagttcaacagttcataaaaatctttttgaaaagcccacatcaa ccggttggccatgtcactgactatttttaccgtgttgaattccagcaaaggggttctccgcatattcatatgcttgtatg gataaataattcacctaaatatcccaaagattccgatgaagaagttgtggaattcgttgacaagtatgttacatgctcaa atggaaacgacaatttatctggtttaattgagctgcaaacacataagcattccaagacatgcagaaaaaagggcaaagct gtatgcagattcggttttccactcccgcctttaagtaaaactatgctcttagaaccgcttgaaacagatgttgagaagta caaaaagaaatatgatgaaatccaagaaaagattaacaaatacaaagatggaatgaatttctcgtacgatcagttcttgc acgaagtagttaatatgccagaagatgaatatataaagtgcataagaagttcaatcaatggtcctaaagtatttttaaag cgaatgccgtcggatgttagagtgaacatgtacaataaaaatgtgctacaagcttggaatgcaaatattgacttgcagtt cgtcctagacccttatgcatgtgcaatgtacattgtctcctacatcagcaaatcccaaaggggaatgagtgctttgatgg atagagcatgcaaagaagcaaggcagggcaatatggacataaaaaaacaagttcgtcatatcggaaatcacttcctgaat agtgtagaggtcagtgcacaagaggcatcgtatttagtgttacaaatgcccttaacaaaaggatcaagggatgtcatatt tataaatacatcgccccctcatgaaagagttcttctattaaagcaacagtctgatctaatggaactcagtccagagtcta ctgatattcattaccaaaatatcatagcacgttactcaaaaagaccgagacaactagacaactggtgcctagcagactat gcctctcaacttgacataaaatatccggaggaaaaaaagaaaactgacattcaggatgaggtaaatgatgacgatttaaa cacagacgatgatgagaacttagaattcactgaagatgatgttctggtcacccttaaaaatggaattagcattaagagac gtatacatgatctgattttgcgatatgtacgctataatgttaagactgatccagaaaaccattacagagagaggttactt ttattcatgccatggcgagatgaaagtgttgatttattgaatggacataacagttatcaggagcactacagacaggttca tcttttagttgacaataaggcaaatttttatgagaaaaatattgacgacattgagcgagctatgcaagaggcagaagaag aatttgcacagcatgatgaaatagctccaaatgcccaacaaacaaatgcagatgatgaagctgaaggtcaacaagaagct agcgactttgtgatgttcaatcctgatagacctcttgagcatagacgatatgacataggcgctgatattggtgcttcaac ttctgtcccaaacattgaatgccatagtgacagagtatctgatgacgaatatttgaagttagtcaggagtttgaatatca aacagagagaattctttacgcatgttctgcattggattaatactaaggatcagcctctttatgcatttttatcaggaggt gctggtgttggaaaatcagtattgattaaagctatctaccaggctttacatagacagttacactcaatagaaggtgaaga tccagatgacattagaatcttattatgtgcctttactggtaaagcagcatataacataaatggcgtgacaattgcctctg cgtttcacaaaaaatataaccagagcaaccaatcgatgagttcggatgaattgaatacattccgaatgaagtacagaaac ctttctgtagtaataattgatgaaatatcaatggttggtgggaaaatgctaagctttattgactgcagattgaaacagtt aactgcgacaaataaacctttcggtggaataagtataattgctgtaggggatctgtttcagttacaacctgttggtgatt catggatattctctgacttgtctgatgggtctcaagctctagcaacaaatttatggaaagagcattttggcatatttgaa ttgacccagattatgagacagaaagatgacatgaatttcgcaaatcttctcaatagactacgaacaaataatttaacaga ggacgacaaagctgaaattgagaagcataatgtcagtccagctcaggaaaattatccaaagaacgttcctcatttgtttg ttgaaaataaatttgtggacaacttcaataaagatttcatagacactttgtctacagtaaaagtcgaagtcttaagtcat gatgccgtagtagcagatttaccaaaatctaccaaagacagactcttgaaaagcttaccaatggattcgagtaaaacagc aaatttagcacattcattagttcttgcagttgggatgatttatgacattaccgttaatctagatgttaatgatggaatag caaatggttctacctgtattgtgaaatatattgaaaatcgaattcctcaaacttcaagaccaagcgttgtgtgggttcta ttcagcgacgttacaattgggtcaaatacaagacagaagtataagcatttgtacaatgtacacattgaccctttgtggac cccaatcttcgatgtgaataggaatttcctgtacaactacaaatcttatcaaagaacacaatttccacttaagccagcag ctgctaaaactgttcacaaggcacagggatgtacagtagacgagattgtcattgatttgtcgcaaagcagaacaagaaaa actccacatattcattatgtagcgatgagcagagtaaggacgtttgaaaaactacatattttgaatttcaatcatgctgc cctgggaactgatgatcgagtcaaagacgaaatgaacagacttcgagaggaagcaaacttagaattatgttacaaaactt tatacgatgttgactcgtgttatttcaaattagcttttaacaatgcacggtcgtttcacaagcattttgctgatatttct gtagatccaaatatattagccgcagacgttattggcattatggagtcaaggctatgtacttcagatgtagatgaaactta tacgctggatggttttcagatacacagatgtgatcaacacagtcaaagtggcaaaagacctagtcatgggctggttttgt atcttaaagaatacttagaatgtaagcaagtaatcagttacagtacagataaagttgaatggttgttctgtgaaacattt catcctaaaatcggatcaattcagctaattcttgtatataaatccccatcctgtacactttcagagttcaaaggcataat tttgcactatcttttgccacgagtagacttatctaaatcattattcgcatttggtgatttcaactttgatatcagctcta gacatccagaatttttgaatttcatgaatcaaacatttcattgcacccagtatgtaaataaggaaactacaaacatgcac tcaattcttgacttacttttcgcaaatgaaccaaacattgtttcggaaaccattgaatgtgcatggtcagaccacaaaat agtgactgcatttatctaa |
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Protein
| Protein ID | pfu_aug1.0_4036.1_52171.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4036.1_52171.t1 MSGSDLYKNSGIQIDESWEQSVSNDSRDIVREFVSNEANGTISDVSNDDTQRTDSEKSTTIDTTGYESDNYSEVDSTENV TGNADTLLEDESLNTDKSYTFAPGEGQHPLSLYTDHDAEYLSFPSIFCGQRRPNNKERLVPVHYSDIAKWELRSQDRRAA QSVPNIFFKLKKIQLKQISDKVHLAVRRIKTKGQKITAAQARDQSTLDKIVRLDEGYYIFRQLRNSPAYLASKKKDVFAM IRQLGLPTWFMSLSSADTRWPFLLKSLAKLDGKILSDDEVSNLSWQERSTLVQKDPVSCSRIFNDRVQQFIKIFLKSPHQ PVGHVTDYFYRVEFQQRGSPHIHMLVWINNSPKYPKDSDEEVVEFVDKYVTCSNGNDNLSGLIELQTHKHSKTCRKKGKA VCRFGFPLPPLSKTMLLEPLETDVEKYKKKYDEIQEKINKYKDGMNFSYDQFLHEVVNMPEDEYIKCIRSSINGPKVFLK RMPSDVRVNMYNKNVLQAWNANIDLQFVLDPYACAMYIVSYISKSQRGMSALMDRACKEARQGNMDIKKQVRHIGNHFLN SVEVSAQEASYLVLQMPLTKGSRDVIFINTSPPHERVLLLKQQSDLMELSPESTDIHYQNIIARYSKRPRQLDNWCLADY ASQLDIKYPEEKKKTDIQDEVNDDDLNTDDDENLEFTEDDVLVTLKNGISIKRRIHDLILRYVRYNVKTDPENHYRERLL LFMPWRDESVDLLNGHNSYQEHYRQVHLLVDNKANFYEKNIDDIERAMQEAEEEFAQHDEIAPNAQQTNADDEAEGQQEA SDFVMFNPDRPLEHRRYDIGADIGASTSVPNIECHSDRVSDDEYLKLVRSLNIKQREFFTHVLHWINTKDQPLYAFLSGG AGVGKSVLIKAIYQALHRQLHSIEGEDPDDIRILLCAFTGKAAYNINGVTIASAFHKKYNQSNQSMSSDELNTFRMKYRN LSVVIIDEISMVGGKMLSFIDCRLKQLTATNKPFGGISIIAVGDLFQLQPVGDSWIFSDLSDGSQALATNLWKEHFGIFE LTQIMRQKDDMNFANLLNRLRTNNLTEDDKAEIEKHNVSPAQENYPKNVPHLFVENKFVDNFNKDFIDTLSTVKVEVLSH DAVVADLPKSTKDRLLKSLPMDSSKTANLAHSLVLAVGMIYDITVNLDVNDGIANGSTCIVKYIENRIPQTSRPSVVWVL FSDVTIGSNTRQKYKHLYNVHIDPLWTPIFDVNRNFLYNYKSYQRTQFPLKPAAAKTVHKAQGCTVDEIVIDLSQSRTRK TPHIHYVAMSRVRTFEKLHILNFNHAALGTDDRVKDEMNRLREEANLELCYKTLYDVDSCYFKLAFNNARSFHKHFADIS VDPNILAADVIGIMESRLCTSDVDETYTLDGFQIHRCDQHSQSGKRPSHGLVLYLKEYLECKQVISYSTDKVEWLFCETF HPKIGSIQLILVYKSPSCTLSEFKGIILHYLLPRVDLSKSLFAFGDFNFDISSRHPEFLNFMNQTFHCTQYVNKETTNMH SILDLLFANEPNIVSETIECAWSDHKIVTAFI |
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