Gene
| Gene Model ID | pfu_aug1.0_4036.1_52172 |
|---|---|
| Locus | scaffold4036.1 : 76019 ... 78499 : - |
| To GenomeBrowser | scaffold4036.1:76019..78499 |
| Genes list of scaffold | scaffold4036.1 |
| Synonym | pfu_aug2.0_380.1_00678 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4036.1_52172.t1 | 1 | 1 | Herpes_teg_N | 213 | 363 | 1.7e-10 | 40.5 | 2.9e-14 | 4.3e-10 | 39.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 2 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4036.1_52172.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4036.1_52172.t1 atgcctagaggaaagaactggcggaaagcagctgctaagaagaacagacaagataaggcagatgtgggtcattcttaccc cacagatattggccatgtccaatcatctgtgcctctgggtgtaggcttcgtcctaacacctacgacatctgtatcggcag gagtgatacttgacactcctgtaacagtggtctctgcggctctccctgagaccactaatgcaaaatttagctcaaatact gactcaaaatttgcctcaaaacctactgcaaaatttagctctaaacttgttacaaataatacttcaaataacatcataaa atgttccacaacaactccaacgaatacctctctttcatatactgaaactatcatttctgaaatgagtatggaaaaatgcc atgaaaatagcaattcagctgaaaagatacagaggaacagaaagtttcagaatgagaatatggtatttgcaactcacaat cagggagactttcatagcacatctcaaagcaaatcttatttgtctcaaagtgataacatttctcaccttgatgaggatgc atttcgaaatattgatggtataagtgcaagtaatgttgataatgcaatgcagacttcagatgtaacgctttttgcttctc atagtcaaagtgactttaggtattcagtattttcaagaggtagtcagtgcacatgcatgtctctttctatgattttgagc cttcaacaaggtattcagctatcaaccaatacattagatcttgtgcttcatcatggtgacaatttatacagaaatgctgt cttggatttacaagtaaaggggaaatttgttaataagctgttgtcgtaccaggaacttccattagcagtacaatatcgag aagattttttctcagtcataaagcacacaatagtttatggtttacctgttattcagtctcataatcttgaagtattttca ttacatgatggcattgtctttgctttaaccaagtctgaaagtctccttatcatgataggggcaatctgctctgcaatcat atttaaagatggaaaatacctcttatttgattcacattcacatgggtctgatggcttaagttcatctgatggcaaagcat tgttaaaaatgttctcatgtattgatgacttagtattgttcctttattccttctattcaagttgcaacatagatcttgag tctcaatttgagattttacctgtaacagttgaaagaattagtcatagtttctttgacttcgaacagaacagtgtcgaaag attaacaagcagaaaaaagtatatgagagaatatatgcagaagaaacgagaaaacaacaatttcagatgcaaagaattgc aagataagcaaaaggcacgacttcatgagcagtacagagatgaagaaancaaaagaaaagctagagatgacactcaatac agagaagtagagaaacagagagagttatctagcaagagaaaatctagattagaccagttttataaggaaaaagaagtatt agccaaaagaaaagctagagatgacagtcaatacagagaagaagagaaacagagagagttatctagcaagagaaaatcta gattagaccagtattataaggaaaaagaagtattagccaaaagaaaagctagagatgacagtcaatacagagaagaagag aaacagagagagttatctagcaagagaaaatctagattagaccagttttataaggaaaaagaagtattagccaaaagaaa agctagagatgacagtcaatacagagaagaagagaaacagagagaattatcaagtaaaaaaaagctagaagtaacagttt ttacaaagaaaaagaaagaatga |
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Protein
| Protein ID | pfu_aug1.0_4036.1_52172.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4036.1_52172.t1 MPRGKNWRKAAAKKNRQDKADVGHSYPTDIGHVQSSVPLGVGFVLTPTTSVSAGVILDTPVTVVSAALPETTNAKFSSNT DSKFASKPTAKFSSKLVTNNTSNNIIKCSTTTPTNTSLSYTETIISEMSMEKCHENSNSAEKIQRNRKFQNENMVFATHN QGDFHSTSQSKSYLSQSDNISHLDEDAFRNIDGISASNVDNAMQTSDVTLFASHSQSDFRYSVFSRGSQCTCMSLSMILS LQQGIQLSTNTLDLVLHHGDNLYRNAVLDLQVKGKFVNKLLSYQELPLAVQYREDFFSVIKHTIVYGLPVIQSHNLEVFS LHDGIVFALTKSESLLIMIGAICSAIIFKDGKYLLFDSHSHGSDGLSSSDGKALLKMFSCIDDLVLFLYSFYSSCNIDLE SQFEILPVTVERISHSFFDFEQNSVERLTSRKKYMREYMQKKRENNNFRCKELQDKQKARLHEQYRDEEXKRKARDDTQY REVEKQRELSSKRKSRLDQFYKEKEVLAKRKARDDSQYREEEKQRELSSKRKSRLDQYYKEKEVLAKRKARDDSQYREEE KQRELSSKRKSRLDQFYKEKEVLAKRKARDDSQYREEEKQRELSSKKKLEVTVFTKKKKE |
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