Gene
| Gene Model ID | pfu_aug1.0_4044.1_44848 |
|---|---|
| Locus | scaffold4044.1 : 19959 ... 36346 : - |
| To GenomeBrowser | scaffold4044.1:19959..36346 |
| Genes list of scaffold | scaffold4044.1 |
| Synonym | pfu_aug2.0_136.1_20294 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4044.1_44848.t1 | 1 | 1 | DnaJ | 19 | 41 | 8.9e-07 | 28.5 | 7.6e-10 | 2.3e-06 | 27.2 |
| pfu_aug1.0_4044.1_44848.t1 | 1 | 1 | DnaJ_CXXCXGXG | 112 | 178 | 7.4e-14 | 51.5 | 4.4e-17 | 1.3e-13 | 50.7 |
| pfu_aug1.0_4044.1_44848.t1 | 2 | 1 | CTDII | 184 | 222 | 5.8e-23 | 80.5 | 0.00016 | 0.47 | 10.3 |
| pfu_aug1.0_4044.1_44848.t1 | 2 | 2 | CTDII | 235 | 311 | 5.8e-23 | 80.5 | 1.2e-22 | 3.4e-19 | 68.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4044.1_44848.t1 | gi|291228607|ref|XP_002734268.1| | PREDICTED: dnaJ homolog subfamily A member 1-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_4044.1_44848.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4044.1_44848.t1 tttgaattaagcttatactttggtccctttcctgaaatcccagattcgccggtagcaaaattcaaacaaatcagccaggc atatgaggtgctgtcagatccaaagaaaagagacctctatgatgaaggaggagaggaggccatcaaaggaggaggaggct cctctcaattccataatccatttgatgtgtttgacatgttctttgggggtggggcatcatcaaggagacgaggaccaacc aagggtagaaatgctgttcatcaaatgaaagtgagccttgaagatatatacaacggagcaacaagaaaactagcactgca gaaaaatgtcatatgtcaaaagtgtgaaggtaggggaggtaaggaaggggcagtagagaagtgtgtgacgtgtcgaggta caggggtccaaataaagatgcagcagcttggaccaatgatgatgcagcaaatccagtcagtgtgctctgattgccgtgga caaggcgagagaattaacgcaaaaaacaggtgtaaaacatgtcagggaaggaaggtcatcaaagaaagcaaaatattaga agtgcatgttgataaaggtatgtcagacggggagaatattcgattccacggagagggggaccaggagccgggagtagaac caggagatgtagtggtcgtgttagacgaagaacaacatgacgtatacagacgtaggggcatagatctactgatgcagatg gagttacagctagtggaagctctttgtggattccgtaaaacaattacaacattagacaagaggactttaattatatcaac tttaccaggtgaggtgattaaacacaatgagattaagtgcataatgaacgagggaatgcctacatacagaaatccatttg agaaagggcgcttgataatcacgtttgacgtcaaatttccggagaaactgcatcatatagcggacattgagaaatttcta cccaagcgtgaagaattagttgtgccggagggagcagatgaacatgacttagtagagtatgacccagaggaagagaagaa tcatcaatacagagaggcgtaccatgacgatgatgacagtgacgatgaattcggacagggagggcaaagagttcaatgtg cgtcacattga |
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Protein
| Protein ID | pfu_aug1.0_4044.1_44848.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4044.1_44848.t1 FELSLYFGPFPEIPDSPVAKFKQISQAYEVLSDPKKRDLYDEGGEEAIKGGGGSSQFHNPFDVFDMFFGGGASSRRRGPT KGRNAVHQMKVSLEDIYNGATRKLALQKNVICQKCEGRGGKEGAVEKCVTCRGTGVQIKMQQLGPMMMQQIQSVCSDCRG QGERINAKNRCKTCQGRKVIKESKILEVHVDKGMSDGENIRFHGEGDQEPGVEPGDVVVVLDEEQHDVYRRRGIDLLMQM ELQLVEALCGFRKTITTLDKRTLIISTLPGEVIKHNEIKCIMNEGMPTYRNPFEKGRLIITFDVKFPEKLHHIADIEKFL PKREELVVPEGADEHDLVEYDPEEEKNHQYREAYHDDDDSDDEFGQGGQRVQCASH |
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