Gene
| Gene Model ID | pfu_aug1.0_40446.1_70364 |
|---|---|
| Locus | scaffold40446.1 : 1 ... 5339 : - |
| To GenomeBrowser | scaffold40446.1:1..5339 |
| Genes list of scaffold | scaffold40446.1 |
| Synonym | pfu_aug2.0_211.1_03794 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | Activin receptor type1 like |
| Description | NCBI blastp hit to gb|ADD80738.1| activin-like receptor 1-like protein [Pinctada fucata]. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_40446.1_70364.t1 | 1 | 1 | TGF_beta_GS | 35 | 63 | 3.9e-14 | 51.6 | 1.0e-17 | 3.9e-14 | 51.6 |
| pfu_aug1.0_40446.1_70364.t1 | 1 | 1 | Pkinase | 66 | 321 | 0.0 | 164.9 | 0.0 | 0.0 | 164.5 |
| pfu_aug1.0_40446.1_70364.t1 | 1 | 1 | Pkinase_Tyr | 66 | 277 | 9.5e-33 | 113.3 | 3.2e-36 | 1.2e-32 | 113.0 |
Transcript
| Transcript ID | pfu_aug1.0_40446.1_70364.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_40446.1_70364.t1 atgcctacctaagcgacgacaagagagccaggaaaacctacaagctcatgaagagctattaccagaagtttatggtggtc tgaaggcaacacaagttggtgacagcacattacaggagatcatagaccagtcctgtacatcagggagtgggtcaggatta ccgttcctggtacaagctacagtggcacggagtatcaacctactagaatgtataggtaaaggccgatatggagaggtgtg gagggggaaatacaacgatgaaaatgtcgccgtcaaaattttctcgtcccgtgatgaagccagctggaaaagagaaaccg agatctacaacacagtgttgttacgtcacgactcgatcctgggttattacggagctgatatgacgagcaggaattcgtgt acgcagctctggctcatcgttcattatcacgaaaacgggtcattatatgattatctccaaagaactgtgttggattacga atccatgctacttcttgctcattcagcagcgaacggcttagtgcatctgcactctgagattcatggaaatcatggcaaac cagccatcgctcaccgtgacatcaaatctaaaaatatcctcgtcaaaagtaacgggacgtgctgtataggggatctggga ctagcgtttacgcattcgacggaaagtggaaaaatagattacggatgtaataataaagtaggaactaaacggtacatggc acctgaactgttggaagagacactgaacgtgaattattttgactcctttaaggcggtggatgtgtatgcgtttggtctgg tattatgggaaatagcaaggaggtgtgaaacaggaggtatggttgaggagtataaaccgccattttgggacgttgtgccg tcagacccctcgtttgaagacatgcggaaagttgtcgtggtagatcagcaacgaccaacgatacctaacagatggagttc agatcaggtatggtatgatggacgccagtaa |
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Protein
| Protein ID | pfu_aug1.0_40446.1_70364.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_40446.1_70364.t1 CLPKRRQESQENLQAHEELLPEVYGGLKATQVGDSTLQEIIDQSCTSGSGSGLPFLVQATVARSINLLECIGKGRYGEVW RGKYNDENVAVKIFSSRDEASWKRETEIYNTVLLRHDSILGYYGADMTSRNSCTQLWLIVHYHENGSLYDYLQRTVLDYE SMLLLAHSAANGLVHLHSEIHGNHGKPAIAHRDIKSKNILVKSNGTCCIGDLGLAFTHSTESGKIDYGCNNKVGTKRYMA PELLEETLNVNYFDSFKAVDVYAFGLVLWEIARRCETGGMVEEYKPPFWDVVPSDPSFEDMRKVVVVDQQRPTIPNRWSS DQVWYDGRQ |
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