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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_405171.1_57746
Locus scaffold405171.1 : 1 ... 397 : -
To GenomeBrowser scaffold405171.1:1..397
Genes list of scaffold scaffold405171.1
Synonym pfu_aug2.0_253.1_10512

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_405171.1_57746.t1 1 1 Neur_chan_memb 2 100 4.4e-17 62.7 1.7e-20 4.9e-17 62.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_405171.1_57746.t1 gi|224060668|ref|XP_002191478.1| 2.0e-11

Transcript
Transcript IDpfu_aug1.0_405171.1_57746.t1
Definition-
>pfu_aug1.0_405171.1_57746.t1
gtcattcttcttggatttttgagtgggctcgtgttcgttatacctgcagaaacaggggagaaaaccggatattctgtgac
ggtttttcttgccctggcagtttttcttactatagtaagtgatctacttccggttaattccgaacaagtttcaatcctcg
gactttatctcctcattcaagttttcatgggagtcatcgttctgattatatcaacgattcagctgcgacttcattttaga
gaaaactctaaatctgtaactggaatttatctaaaagtaattaatttacagaaacggtgttgtaaatgtcggaagtcttc
aaagaaggttaacgaagttgacgtcgttccggaaaagaatgaaacatttgattccgatgaagaatatgataaattag

Protein
Protein IDpfu_aug1.0_405171.1_57746.t1
Definition-
>pfu_aug1.0_405171.1_57746.t1
VILLGFLSGLVFVIPAETGEKTGYSVTVFLALAVFLTIVSDLLPVNSEQVSILGLYLLIQVFMGVIVLIISTIQLRLHFR
ENSKSVTGIYLKVINLQKRCCKCRKSSKKVNEVDVVPEKNETFDSDEEYDKL

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