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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_40539.1_70371
Locus scaffold40539.1 : 1 ... 5155 : -
To GenomeBrowser scaffold40539.1:1..5155
Genes list of scaffold scaffold40539.1
Synonym pfu_aug2.0_2230.1_02054

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_40539.1_70371.t1 1 1 Neur_chan_LBD 2 165 1.4e-30 106.0 1.1e-34 1.6e-30 105.8

Transcript
Transcript IDpfu_aug1.0_40539.1_70371.t1
Definition-
>pfu_aug1.0_40539.1_70371.t1
atgtccatggtaaattatgacgatgtgtctggagtcctttcgcttaccgggggaatccacctgatctgggtggaccctcg
tttgacgtggacgccaagcgaccattccaatgttcaggatttcgtgataaagaaaaccatgatttggacaccggatgttt
acattacgaatcctgcagacgacctagagacgattgtagacaatagcttctatgctcgtgttttctacaatggcgtcgtc
agactgtctgtaggaagtggtattgaagtattgtgctccagcgatatgacatttttcccattcgacgtccagccctgttc
catcattatgggaccatggggttactacagttacgaggtcagcctatatccttttctaaactacgttgacttaacctact
tcaccaagaacaacatttgggatatagagtcaaccttcgctgaatcatttgcctacggtcaatacggtggattcgtagaa
ttcaccttaaagattcgacatttcgatggcggacgaggacagacgtga

Protein
Protein IDpfu_aug1.0_40539.1_70371.t1
Definition-
>pfu_aug1.0_40539.1_70371.t1
MSMVNYDDVSGVLSLTGGIHLIWVDPRLTWTPSDHSNVQDFVIKKTMIWTPDVYITNPADDLETIVDNSFYARVFYNGVV
RLSVGSGIEVLCSSDMTFFPFDVQPCSIIMGPWGYYSYEVSLYPFLNYVDLTYFTKNNIWDIESTFAESFAYGQYGGFVE
FTLKIRHFDGGRGQT

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