Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_407.1_43648
Locus scaffold407.1 : 52176 ... 63388 : +
To GenomeBrowser scaffold407.1:52176..63388
Genes list of scaffold scaffold407.1
Synonym pfu_aug2.0_393.1_10726

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 24
egg-4cell 5
8-16cell 5
egg-Dshape 3
trochophore 2
>Adult tissues
Dshape 2
adductorMuscle 7
maleGonad 5
mantle 10
mantleEdge 3
mantlePallium 2
pearlSac 1

Transcript
Transcript IDpfu_aug1.0_407.1_43648.t1
Definition-
>pfu_aug1.0_407.1_43648.t1
atgaaagatcttgtcacaaggaatacacatgtacaatatgaaagccctatcactaaccattcaaaagttatgcccaatgt
taaagtttttgagaagtacgtgaaaggtcaaggttatggtcatgaggtcaaagtgtttggtatcaatggaaagccgttct
tgagaagaagtcgaaaatgtgaaaagttcacgacggacgccggacaccacactatgacaatagctcacttgagctttgct
cagccgttcttgagaagaagtcgaaaatgtgaaaagtttacgacggacgacggacaccggacgccacactatgacaatag
ctcactagagctttgctcagcaggacctaacgagcaaacaaccaatgaaattcgacggtaa

Protein
Protein IDpfu_aug1.0_407.1_43648.t1
Definition-
>pfu_aug1.0_407.1_43648.t1
MKDLVTRNTHVQYESPITNHSKVMPNVKVFEKYVKGQGYGHEVKVFGINGKPFLRRSRKCEKFTTDAGHHTMTIAHLSFA
QPFLRRSRKCEKFTTDDGHRTPHYDNSSLELCSAGPNEQTTNEIRR

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