Gene
| Gene Model ID | pfu_aug1.0_4074.1_59429 |
|---|---|
| Locus | scaffold4074.1 : 7566 ... 20095 : - |
| To GenomeBrowser | scaffold4074.1:7566..20095 |
| Genes list of scaffold | scaffold4074.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4074.1_59429.t1 | 1 | 1 | RVT_1 | 271 | 374 | 3.0e-10 | 39.8 | 4.6e-14 | 6.8e-10 | 38.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4074.1_59429.t1 | gi|327281562|ref|XP_003225516.1| | 1.0e-29 |
Transcript
| Transcript ID | pfu_aug1.0_4074.1_59429.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4074.1_59429.t1 atgagagaaccctttgaatacccgtttataattaataacagaccagacgatatgaggaacagcctactagccaatcagca ccgtcttagtaactgtattcataatattggggatagtgctattgagttagatgctgcagtagaatcgttttctgatatcc ttaatgatatttttgatccatactgtaagcatgattatggttttaaacataaatcggtgaaagagagacaagataaaatt tggtttgattcaagatgtcatgaattgaagagaatatataaaatcaatcttcgggaatttaatatgtgccatacacatag aaatagacagaaattggttgaaagtaaaagagagtataaaagttacatgaggagaacaaagaatcaatatctatcatacg aaggtaataaaatgaattttataaagaaaaagaatcctagaaagttttataagcgcttcaaaaagagcagaaaatccgat acggataaactgaattgtactgatttttacgatcacttcagaaatttaggccaggtcgacaatcagacaataaataacga taatgatgtgttattaaacgaggaaaattgtacttttgaagaattagatgctgatatatcgtacgaagaaatagaaatag ttttacgtaaaatgaaatgtaacaaatcacccggaatagataatctgttatacgagtacttcaagaaattcagtgatatc cttgtacctcatcttcacatcatttttaattctattttgaaattaggtcatattcctgatagctggggaaagggaatcat aattcccgtccataagaaaggggacacgggtaatactgataattatcgtggaataactttaatgagttgtttattaaaag tttttacaaatttattgaatgatagattactgcattggagcgaaacgtacggggttatatctgatgcgcaatttggtttt cgaaaaggtttaggtacagttgacgctattttcgcgcttcatggaattatcgataaatttttgtctaataataagaaatt atattgttgcttcatagactataggaaggcttttgattgcattgacagaaacttactcttttacaaattggcacgtattt ttgctcgacttcctctggtccgaaaaacctga |
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Protein
| Protein ID | pfu_aug1.0_4074.1_59429.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4074.1_59429.t1 MREPFEYPFIINNRPDDMRNSLLANQHRLSNCIHNIGDSAIELDAAVESFSDILNDIFDPYCKHDYGFKHKSVKERQDKI WFDSRCHELKRIYKINLREFNMCHTHRNRQKLVESKREYKSYMRRTKNQYLSYEGNKMNFIKKKNPRKFYKRFKKSRKSD TDKLNCTDFYDHFRNLGQVDNQTINNDNDVLLNEENCTFEELDADISYEEIEIVLRKMKCNKSPGIDNLLYEYFKKFSDI LVPHLHIIFNSILKLGHIPDSWGKGIIIPVHKKGDTGNTDNYRGITLMSCLLKVFTNLLNDRLLHWSETYGVISDAQFGF RKGLGTVDAIFALHGIIDKFLSNNKKLYCCFIDYRKAFDCIDRNLLFYKLARIFARLPLVRKT |
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