Gene
| Gene Model ID | pfu_aug1.0_4074.1_59431 |
|---|---|
| Locus | scaffold4074.1 : 28926 ... 34949 : + |
| To GenomeBrowser | scaffold4074.1:28926..34949 |
| Genes list of scaffold | scaffold4074.1 |
| Synonym | pfu_aug2.0_172.1_07100 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4074.1_59431.t1 | 1 | 1 | TIMP | 19 | 197 | 1.1e-22 | 80.4 | 1.8e-26 | 1.3e-22 | 80.2 |
| pfu_aug1.0_4074.1_59431.t1 | 1 | 1 | NTR | 28 | 111 | 2.2e-06 | 27.2 | 3.7e-10 | 2.8e-06 | 26.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4074.1_59431.t1 | gi|221118017|ref|XP_002156125.1| | 6.0e-13 |
Transcript
| Transcript ID | pfu_aug1.0_4074.1_59431.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4074.1_59431.t1 atggatttgttatttctttatatgatgatcgtgaatattattcatgcattaggatgcagctgtgtcaagcatcacaacca gaaacgttactgttcgtccgatatagcaataaaagcatttgttctagaagaaaaagaagtgttcaatatggaaggttacg gacatgcctcagaccttatttatgacgttgaagtcaaagaagtcttcaggaacaagttcaatgagaaattcaagatagac gtcggagaagaagtaaaggttgtaacaccaggtacagacggtgactgtaaagctgatataaagaatggtacagattacct cattgtagggtcatttagagaaggtgcaatatatgtgacgtcatgtgactggagctcaaggtttgattacgtagcagaat cacatgttgaaggtttgatgggcaaatacgattgttcttgcaaggttttcacattaagctacgcattacgagactttcca cgagatttccgcagtgtgtgtttgctcggctatcctcagagatatacggacacctgtctacgtacacatgggttctgcca gagacacacggggactggtcagtgtatgtggactgtagatcccgaggacagggactgttaa |
|
Protein
| Protein ID | pfu_aug1.0_4074.1_59431.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4074.1_59431.t1 MDLLFLYMMIVNIIHALGCSCVKHHNQKRYCSSDIAIKAFVLEEKEVFNMEGYGHASDLIYDVEVKEVFRNKFNEKFKID VGEEVKVVTPGTDGDCKADIKNGTDYLIVGSFREGAIYVTSCDWSSRFDYVAESHVEGLMGKYDCSCKVFTLSYALRDFP RDFRSVCLLGYPQRYTDTCLRTHGFCQRHTGTGQCMWTVDPEDRDC |
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