Gene
| Gene Model ID | pfu_aug1.0_408.1_50845 |
|---|---|
| Locus | scaffold408.1 : 14046 ... 43278 : + |
| To GenomeBrowser | scaffold408.1:14046..43278 |
| Genes list of scaffold | scaffold408.1 |
| Synonym | pfu_aug2.0_68.1_26780 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_408.1_50845.t1 | 3 | 1 | Death | 192 | 211 | 6.1e-08 | 32.3 | 0.39 | 1500.0 | -1.0 |
| pfu_aug1.0_408.1_50845.t1 | 3 | 2 | Death | 615 | 663 | 6.1e-08 | 32.3 | 2.0e-07 | 0.00074 | 19.2 |
| pfu_aug1.0_408.1_50845.t1 | 3 | 3 | Death | 701 | 777 | 6.1e-08 | 32.3 | 0.00032 | 1.2 | 8.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_408.1_50845.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_408.1_50845.t1 atgatcatgtctgctattataatcatcatcatcatcatcatcatcatcgtcatcatcatcatcatcatcaccaccaccac cataatcatcatcatcatcatcatcatcgtcatcgtcatcaccaccaacacctcttcttctttttgtacttcagaatttc tccctctatttctttccatttggatacccagcagccggcagccctctatgtcaatgatgccctttcctaatgattttgtt gatgatgaaatacaggaattctttgaagaaataccaggattaccggatcaatatgatggagaagacagtgactttcaaat ctctgaggaaatggatgaaacactttctccaagaaaagagctaaagactccaaaatccttaaatctactgaaagaaattc ttcagaagaaagaagatgaaccagaaaagcgcttcagcatagaggtgtgggactttgggggacaaggatgcttctactgt acacaccagtccttcttgtcctacagatctgtctatttgttggtgtttgatatttccaaggacctggatgactttgtgaa tgatgaagatttagatcctagcgagagaaaaaagtcaacagttagagagtttttgtcattctggataaattccattaaaa cctatgctggaggtgtggtacgaggttgcccaaagatcattattgttggaacacatctagataaaatagagaaaagtaag cggctccagaaagttggagaatatctaatggccatctgtgaaacatacgcagaagacatagcaagtggacagctcatctt agacaacaagttggtgtttggctttaacaatcatggtatagagatccttcaaaatgcaatcattaaggtggccaagggac agcccttctggggagaggagttaccaaaggcatggattcccttccagcataggatatctgtccttcgtcaggacggcaag aagatcatttcttgtaaagaaatcaaggatttcaacctcacattgcctgttccccttgaccttgagaacatagatctttg tctgaggttccttcactctgtgggatctatcatattctactcacagaaagctctatcagcctatgttattctagagccaa agtggttagtcacaacactgcgctctctgatcacatgtgagagtttctgtgcacaagaagaagttcgtcgcggagcatgc agaatcttacaacaaatgggtttgataagcatggagagaatagaagcaatttggaaactcccagaattttctgaacttat acctgtcaaggatcacatgttagccataatggagcgactagacctaattgcaaagcctaaaatatatcagaatgggtcca ttgtaacaactgattctttcttcatccctgccatggcaaaaaattcccctagtccaaaatggctgacatccatcgtgtct agcagcagagtgcagacgtgtaccattgacttcagttcaagtttcttgtcacctgcggtgttttaccgtctgatcagtag ctgcatctgtatatggccggtccatcaggataagctgtactttggctgctgccagctcaggttggatccccagcacagac tgctcatactgaagagaggggacaggatctgtcttgtctttgagcacagaagaacagctgtcgccatcaacaagaacctt gtacgaggagtgatggacgtagtggttgacatactgcacgacatcatcaacatttatcctggcagaaaagattctccatt cttcacaatatcaggaaacttcactgagctgatgagatttgccaaaagctggtttggagccaaggataatttagtgctga tcgctgtggaactaggagtcgacatgggggagttggagcaaattgaacatgaccatcgggacaaccttgtgctgaagacg ttctacatcctggagagatggtcccgtaggagagggaaatcaagctcgttcaaggagctgttagaagcttcccaatgtga tgtacataccatatgcaagatcatgagggaagatgatgcaagagtgcatcagaccataccaacatccaggcttgaagaac aatgcacagacgaaatgatagacaaaatctcagttttgattggtagggatttcatacactttggcttggagctcggactg caccaagaagacatagaggaaatcagaaatagcaaagacacacggggactgtttgatatgaaccgaaggataatgatggt tacgcgtgatcacagacctggtggtaccagtctcagtgtcaggtccttgtcgtgtgcactgctgaggatcggacatgtaa aggctttcgaatactttgaggaccagtttatcacagaacatgatgacgatatccaagacgattggtga |
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Protein
| Protein ID | pfu_aug1.0_408.1_50845.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_408.1_50845.t1 MIMSAIIIIIIIIIIIVIIIIIITTTTIIIIIIIIIVIVITTNTSSSFCTSEFLPLFLSIWIPSSRQPSMSMMPFPNDFV DDEIQEFFEEIPGLPDQYDGEDSDFQISEEMDETLSPRKELKTPKSLNLLKEILQKKEDEPEKRFSIEVWDFGGQGCFYC THQSFLSYRSVYLLVFDISKDLDDFVNDEDLDPSERKKSTVREFLSFWINSIKTYAGGVVRGCPKIIIVGTHLDKIEKSK RLQKVGEYLMAICETYAEDIASGQLILDNKLVFGFNNHGIEILQNAIIKVAKGQPFWGEELPKAWIPFQHRISVLRQDGK KIISCKEIKDFNLTLPVPLDLENIDLCLRFLHSVGSIIFYSQKALSAYVILEPKWLVTTLRSLITCESFCAQEEVRRGAC RILQQMGLISMERIEAIWKLPEFSELIPVKDHMLAIMERLDLIAKPKIYQNGSIVTTDSFFIPAMAKNSPSPKWLTSIVS SSRVQTCTIDFSSSFLSPAVFYRLISSCICIWPVHQDKLYFGCCQLRLDPQHRLLILKRGDRICLVFEHRRTAVAINKNL VRGVMDVVVDILHDIINIYPGRKDSPFFTISGNFTELMRFAKSWFGAKDNLVLIAVELGVDMGELEQIEHDHRDNLVLKT FYILERWSRRRGKSSSFKELLEASQCDVHTICKIMREDDARVHQTIPTSRLEEQCTDEMIDKISVLIGRDFIHFGLELGL HQEDIEEIRNSKDTRGLFDMNRRIMMVTRDHRPGGTSLSVRSLSCALLRIGHVKAFEYFEDQFITEHDDDIQDDW |
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