Gene
| Gene Model ID | pfu_aug1.0_408.1_50848 |
|---|---|
| Locus | scaffold408.1 : 75226 ... 95901 : + |
| To GenomeBrowser | scaffold408.1:75226..95901 |
| Genes list of scaffold | scaffold408.1 |
| Synonym | pfu_aug2.0_12515.1_19779 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_408.1_50848.t1 | 3 | 1 | RED_N | 82 | 145 | 0.0 | 167.3 | 5.1e-18 | 2.5e-14 | 53.0 |
| pfu_aug1.0_408.1_50848.t1 | 3 | 2 | RED_N | 145 | 276 | 0.0 | 167.3 | 1.6e-40 | 8.2e-37 | 126.6 |
| pfu_aug1.0_408.1_50848.t1 | 3 | 3 | RED_N | 299 | 304 | 0.0 | 167.3 | 0.94 | 4600.0 | -3.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_408.1_50848.t1 | gi|291226654|ref|XP_002733308.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 3 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_408.1_50848.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_408.1_50848.t1 atgatgggatcaacatgtatgcgctataaggcatccctaaaatgtgactccctagggggtaaggacgtcctccgatcgtg gcatgccttgaccaatgaggatttccgtaagatgttgatgacccctcgggtcacttcatcatcaacagcatcggcagtgg ctcctaaagcagtagctaaagtccctaaaagtgtaccagtcaaacaggaggaagaagatgatgatcctgccacgagaaga aagaagaaaaaaatttattatgccaaactcaagaaactggaagaagaaagacaaaaagagctagagtctaagtacaggga cagggctaaggagagaagagatggagtcaacagggattacgaacagacagaaatcattagtactacggcagattataggg ctgtggctcctgatatcaaggcgactatccaggtgagggcagaaataagttacaaagagagagaagaagaagaaacaatg gaggaagtagtggataaaaaagaagaaaaagaagctgaaccagaggagcagattcagttcaaaaccaaaatggggaggaa tatctaccggactctgttcaagcagaaacagccggagaggaacgagctgttcttacctagacgtatggcgtatgtagtag acatcgaggatgaatttgccgacagtgatgttcccacaacaacaattcggagcaaggctgattgtccgacactcgaggct aatgccactctgacaaccaatgatattgtcatcaacaaactgacacagatcttatcctacctcagacagggaaggcgaga aaacaaaaaactcaaaaagaaagaaaaaggtaaaataaaagaggaggataaggccagagagaagcttccaggagctgata tggagaaagtagctgcagacaaggagaaggagaggttaaagaagatgaaggccaggatggagatagacagctatgctgaa tgttatcctgggtacgtcactgtcataactttaatcaggaactaa |
|
Protein
| Protein ID | pfu_aug1.0_408.1_50848.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_408.1_50848.t1 MMGSTCMRYKASLKCDSLGGKDVLRSWHALTNEDFRKMLMTPRVTSSSTASAVAPKAVAKVPKSVPVKQEEEDDDPATRR KKKKIYYAKLKKLEEERQKELESKYRDRAKERRDGVNRDYEQTEIISTTADYRAVAPDIKATIQVRAEISYKEREEEETM EEVVDKKEEKEAEPEEQIQFKTKMGRNIYRTLFKQKQPERNELFLPRRMAYVVDIEDEFADSDVPTTTIRSKADCPTLEA NATLTTNDIVINKLTQILSYLRQGRRENKKLKKKEKGKIKEEDKAREKLPGADMEKVAADKEKERLKKMKARMEIDSYAE CYPGYVTVITLIRN |
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