Gene
| Gene Model ID | pfu_aug1.0_40847.1_55789 |
|---|---|
| Locus | scaffold40847.1 : 492 ... 5185 : - |
| To GenomeBrowser | scaffold40847.1:492..5185 |
| Genes list of scaffold | scaffold40847.1 |
| Synonym | pfu_aug2.0_3253.1_12413 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_40847.1_55789.t1 | 2 | 1 | zf-B_box | 17 | 58 | 2.1e-16 | 59.4 | 2.0e-09 | 5.8e-06 | 26.0 |
| pfu_aug1.0_40847.1_55789.t1 | 2 | 2 | zf-B_box | 73 | 108 | 2.1e-16 | 59.4 | 2.3e-13 | 6.8e-10 | 38.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_40847.1_55789.t1 | gi|260824627|ref|XP_002607269.1| | hypothetical protein BRAFLDRAFT_88217 [Branchiostoma floridae] | 3.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_40847.1_55789.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_40847.1_55789.t1 atggcgtttgcctcgtcaagaataggggcacaggaggctataataaaaccgtgtgatctatgtgaggacgatgaaaacgt caactggttctgtaaggactgtgatcaaaatctatgtgacagatgtaaaacgctacaccttcgcagtaatgtctcaaagt cacacatcatactttcgatttccgaaggatttgcaattgggaaaaggaatttatcgaacatttgccgagaacatgatgaa ctatttacgttctattgtagaacttgcgatcggaacatttgttcgaattgtttgtcctcggaacataaaaagcatgactt cgtaggtttgcgtgagcttcagtcagaggtacagaagcagttagatgacgtcatcaaagaaaaggaaacagaaaagcaga caatgacaaaaaattatgatgacttggttcaacacgaggacaaatcaggatatcatttaaaggagcagtatgctaaaatc gatgaccgagttaaggctattagattggctgctgatgaggaagcagagatacttaaggaatcaatgagttcaataaaaca tcaacaagacgaagaggtgaaagaaggcaaacaaaaaatacatactctgaccggactctacaataaagagatccaaagcg tgcgacaagaacttcgccttcagacgacctcatcgttaaatggcttcgtgaaggaatctataacaaaacttaagacattg aagccaatatctattgcgataccagacgaacagcaactaccttttgaggaacaagttgaagacagtcagatcagagaaac gattggaaaactaattggatcacaatatatttctgaaatagagattacaaaaggaggcaaagatggagcgaaatgcaatg ttttatcacatttagagattgtcagaacattcaacatggataaatttagacattgttattcaatgtgtcttagtcctgat ggtagtatatggattggtggttttggatatgtgtacaagatgagctctgactgctctacagtcctccatcagatacccac taggaattcttatgtgtgttattacatagcatgtctacagtcaggtgatgctgttgtgtcttttggtggtggagtaccct acgtagaaagattcacctctgacgggagaagagtagaattcacagaactaccacgaagaaaaaattacgatgaagctgtc aataccaatgacgaggtcgtcatcaatgttgataggaaatgtattattatattttcaaacaaagggaaacagctccggga aattgaagtcgatggtggaatacaaacattttgcacagacagagatggacacatcattgttgcacatgcgaaatcaccaa acctgacaatacttgatggtatgagtggagaagtcataatatcatggagagtttccatatccgacataaaacgtcttaca tgtgacagatatggaaacgttctggccacgaacaaggagagaaatatttatttcttcagtaaaaacggagatgtccagaa aactttcacagtggactgtattggaatcattggaatctgtgttaatcaggacgatcatttgttgatactgatggatagga agcgcaaatgcgaaataaaagttacgaagtacttagagtaa |
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Protein
| Protein ID | pfu_aug1.0_40847.1_55789.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_40847.1_55789.t1 MAFASSRIGAQEAIIKPCDLCEDDENVNWFCKDCDQNLCDRCKTLHLRSNVSKSHIILSISEGFAIGKRNLSNICREHDE LFTFYCRTCDRNICSNCLSSEHKKHDFVGLRELQSEVQKQLDDVIKEKETEKQTMTKNYDDLVQHEDKSGYHLKEQYAKI DDRVKAIRLAADEEAEILKESMSSIKHQQDEEVKEGKQKIHTLTGLYNKEIQSVRQELRLQTTSSLNGFVKESITKLKTL KPISIAIPDEQQLPFEEQVEDSQIRETIGKLIGSQYISEIEITKGGKDGAKCNVLSHLEIVRTFNMDKFRHCYSMCLSPD GSIWIGGFGYVYKMSSDCSTVLHQIPTRNSYVCYYIACLQSGDAVVSFGGGVPYVERFTSDGRRVEFTELPRRKNYDEAV NTNDEVVINVDRKCIIIFSNKGKQLREIEVDGGIQTFCTDRDGHIIVAHAKSPNLTILDGMSGEVIISWRVSISDIKRLT CDRYGNVLATNKERNIYFFSKNGDVQKTFTVDCIGIIGICVNQDDHLLILMDRKRKCEIKVTKYLE |
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