Gene
| Gene Model ID | pfu_aug1.0_40870.1_19788 |
|---|---|
| Locus | scaffold40870.1 : 1716 ... 5067 : + |
| To GenomeBrowser | scaffold40870.1:1716..5067 |
| Genes list of scaffold | scaffold40870.1 |
| Synonym | pfu_aug2.0_253.1_10511 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_40870.1_19788.t1 | 1 | 1 | Neur_chan_LBD | 5 | 185 | 1.6e-37 | 128.7 | 3.00004e-41 | 2.2e-37 | 128.2 |
| pfu_aug1.0_40870.1_19788.t1 | 2 | 1 | Neur_chan_memb | 192 | 279 | 1.4e-14 | 54.6 | 9.9e-17 | 7.3e-13 | 48.9 |
| pfu_aug1.0_40870.1_19788.t1 | 2 | 2 | Neur_chan_memb | 327 | 363 | 1.4e-14 | 54.6 | 5.8e-05 | 0.43 | 10.4 |
Transcript
| Transcript ID | pfu_aug1.0_40870.1_19788.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_40870.1_19788.t1 atggaagaaagcggtttccctgtgatcattgacctaagcttctttcttcttggcataaacgaaatcaatgaagtgtcgga gaaaatgacaacaaccggttatcttcagatctcttggtttgaccaaggacttgtttggacacctgcatctcataataata ctgaacgtgtttttgtgccccaggatgacatttggaaaccggatattttcttgcagaatggctttaagaaattcactgaa ctaggaggatcttactattacatagaagtcaataatgatggttcagcgctgtgggtgccatttgaagtatttgagagtag atgctcccttgatacgagctactatccttttgataagcagaaatgttacataacgtttgttgtttggagtcattcggtga tcgaggtagaaatcatgaaaagtcaacaagggatagtgtacgatgaacagttccaagcaaatagcgtttgggacatcctt tctatatcgtatgatgtcagcaaggaaactagagagtccaaaatcacatttactttccatctgaagagaaaaactctcta ttatatcgtaaacattctgcttcctgtggtatttctagggtttctcaacgggctagtgttcgtaatccctgcagacaccg gagaaaaaacaggatattctgtgacagttttcttgtccttggcagtatttctgacaattatcagcactgtgctgccggta aattcagaaaaagtgtccattcttggcatttaccttctattacaagtagtattgggagtcattgttttgattgtctctac aattcagttacgcttgaacgcgcggagtgactcaaaacccgtgagtggaatagctctgaaacttactcgcttgaaaaaca aaggctgttgtcggaaaaaggacacagtttcgaatcgctcaaatgaagtcggtgttattgatttggaaaacgaaaaagac ttcacccagcccgttaaaactgaaactgatgaagatgaatatacttgggcagatgttgtaacagctttagatttctacgg attttggatgtttatctgtgtttacaccattctgactgttatgatgttcattattctaactgtatga |
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Protein
| Protein ID | pfu_aug1.0_40870.1_19788.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_40870.1_19788.t1 MEESGFPVIIDLSFFLLGINEINEVSEKMTTTGYLQISWFDQGLVWTPASHNNTERVFVPQDDIWKPDIFLQNGFKKFTE LGGSYYYIEVNNDGSALWVPFEVFESRCSLDTSYYPFDKQKCYITFVVWSHSVIEVEIMKSQQGIVYDEQFQANSVWDIL SISYDVSKETRESKITFTFHLKRKTLYYIVNILLPVVFLGFLNGLVFVIPADTGEKTGYSVTVFLSLAVFLTIISTVLPV NSEKVSILGIYLLLQVVLGVIVLIVSTIQLRLNARSDSKPVSGIALKLTRLKNKGCCRKKDTVSNRSNEVGVIDLENEKD FTQPVKTETDEDEYTWADVVTALDFYGFWMFICVYTILTVMMFIILTV |
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