Gene
| Gene Model ID | pfu_aug1.0_4090.1_37797 |
|---|---|
| Locus | scaffold4090.1 : 39606 ... 64477 : + |
| To GenomeBrowser | scaffold4090.1:39606..64477 |
| Genes list of scaffold | scaffold4090.1 |
| Synonym | pfu_aug2.0_4031.1_05934 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4090.1_37797.t1 | 2 | 1 | Transglut_N | 37 | 98 | 6.4e-16 | 58.4 | 8.7e-19 | 3.2e-15 | 56.1 |
| pfu_aug1.0_4090.1_37797.t1 | 1 | 1 | Transglut_core | 95 | 169 | 3.1e-12 | 46.6 | 1.6e-15 | 5.8e-12 | 45.8 |
| pfu_aug1.0_4090.1_37797.t1 | 2 | 2 | Transglut_N | 274 | 295 | 6.4e-16 | 58.4 | 0.93 | 3500.0 | -2.0 |
| pfu_aug1.0_4090.1_37797.t1 | 2 | 1 | Transglut_C | 284 | 347 | 6.4e-06 | 26.1 | 0.00076 | 2.8 | 8.0 |
| pfu_aug1.0_4090.1_37797.t1 | 2 | 2 | Transglut_C | 398 | 436 | 6.4e-06 | 26.1 | 5.5e-06 | 0.02 | 14.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4090.1_37797.t1 | gi|322800397|gb|EFZ21401.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4090.1_37797.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4090.1_37797.t1 atgctcacttttgtgttctattatgatgggggtggaagaaggccaagaaaacctgcacgtgataaacccccaaaggagaa caatgatgtggatgagccatataaagatctgaaggttgaagacgtcgatttactgatcgatgaaaactccaaagatcacc acactgacaaatatgacctaaccgactctagtgctaaacttgttctacggcgaggatctccgttcaatgtgaaaatccgc ttttcaaggaaagtcaatttacaggaggacaatttgagattcgcattaactgcagtgtgcagagccatagggataccgtg tagaagcgtcacaaacttttcctctgctcatgacacggatggatctataaccattgacagatatttcgatcttgagggca ataaagagggcggcgattcaacatggaatttccatgtttggaacgaagtatggatgagaagacccgacatatctaaagca aattatgatggttggcaagctattgatagtactccacaggaggagagcggtggcacatttcagtgcggtcctatgccagt agcagcaataaaggaaggcgatgtgtcctacaactttgacggacccttcatatttgctgaagttaatgcagacattgtga cttgggtgaatggaagagatggacagccttatttttcagacatagacagagtgcgcatggaccagacatgcacgtttcga atacttaaccctcgaactgaaaaagaaaaagacgttgtgttgacagcatttaaagcaggacatacctactctggagaaaa ttacaagttgtacaaaggtttcataaactcgcaagaaaagaatgtagaggctaaactagatacaccagttgacgcaaaat acggagaagactttacagtaagtttgactggtataaacaggtcggataaggaacagttgttatactgtactgtctcactt acacctgaaaacagtgctgctgaaagacttaaacgaataaagttcagagatatggaaggatccattccaccaaaagggga agatggtaaaatcagtcttgaagtagtagtaacagttgacgaatacattgggaggcttcatgatggatgttttatctctg tggcgggagtcatattcaataacactacaaaacaggcctctcttattgaaaggtcaatcatgctggtcaaaccggaactc aaagtagagattatcgatgatgatgtacagctcaataagcctttctctataggaatgagttttaccaacccactgaatgt cccattgacgcagtgcgaaatcgacattgatgctaagggaattgtcatagaggacccaaaagctatgaagcgaagatcga ctgaaagtgcaggtacaacggtctag |
|
Protein
| Protein ID | pfu_aug1.0_4090.1_37797.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4090.1_37797.t1 MLTFVFYYDGGGRRPRKPARDKPPKENNDVDEPYKDLKVEDVDLLIDENSKDHHTDKYDLTDSSAKLVLRRGSPFNVKIR FSRKVNLQEDNLRFALTAVCRAIGIPCRSVTNFSSAHDTDGSITIDRYFDLEGNKEGGDSTWNFHVWNEVWMRRPDISKA NYDGWQAIDSTPQEESGGTFQCGPMPVAAIKEGDVSYNFDGPFIFAEVNADIVTWVNGRDGQPYFSDIDRVRMDQTCTFR ILNPRTEKEKDVVLTAFKAGHTYSGENYKLYKGFINSQEKNVEAKLDTPVDAKYGEDFTVSLTGINRSDKEQLLYCTVSL TPENSAAERLKRIKFRDMEGSIPPKGEDGKISLEVVVTVDEYIGRLHDGCFISVAGVIFNNTTKQASLIERSIMLVKPEL KVEIIDDDVQLNKPFSIGMSFTNPLNVPLTQCEIDIDAKGIVIEDPKAMKRRSTESAGTTV |
|