Gene
| Gene Model ID | pfu_aug1.0_4097.1_16286 |
|---|---|
| Locus | scaffold4097.1 : 32206 ... 52805 : + |
| To GenomeBrowser | scaffold4097.1:32206..52805 |
| Genes list of scaffold | scaffold4097.1 |
| Synonym | pfu_aug2.0_4124.1_15926 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4097.1_16286.t1 | 1 | 1 | Atg8 | 85 | 174 | 2.4e-38 | 130.2 | 4.99983e-42 | 3.7e-38 | 129.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4097.1_16286.t1 | gi|298108445|gb|ADI56518.1| | GABA(A) receptor-associated protein [Haliotis diversicolor] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 2 |
| 8-16cell | 1 |
| egg-Dshape | 2 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4097.1_16286.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4097.1_16286.t1 atgccttatcttaacagctccttaggtgattgtctcgatgtacattttgatgtacagatcagatttcatgcaataatacg gaagtgttccaactctatatcttcccgaagaaatttcaaaccaatttattatgcaccagacacgttgagagaaacgccat cttgttgtcaaaagtacagaacaggaaattttataactgagaaatcctttaagaaaatgaagtgggaatacaaagaagaa catccttttgagaaaaggagagccgaaggagagaagataaggaaaaaatacccagacagagtccccgtcattgttgagaa agcaccaaaggctcgagtgggtgatttggacaagaagaagtacttggtgccatcagatttaactgtaggacagttttact tccttataaggaagagaatccatctgcgaccagaagatgcgttattcttctttgttaataatgtgattcctccaaccagc gccacaatgggttccctttatcagtatgaggatgctgatgacccaaaggtttcacaccacattgatccaatgtcatatga caaaggtcaaggtcaagtatattttttaatgaaatag |
|
Protein
| Protein ID | pfu_aug1.0_4097.1_16286.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4097.1_16286.t1 MPYLNSSLGDCLDVHFDVQIRFHAIIRKCSNSISSRRNFKPIYYAPDTLRETPSCCQKYRTGNFITEKSFKKMKWEYKEE HPFEKRRAEGEKIRKKYPDRVPVIVEKAPKARVGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVIPPTS ATMGSLYQYEDADDPKVSHHIDPMSYDKGQGQVYFLMK |
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