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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4099.1_08806
Locus scaffold4099.1 : 24306 ... 26981 : +
To GenomeBrowser scaffold4099.1:24306..26981
Genes list of scaffold scaffold4099.1
Synonym pfu_aug2.0_162.1_07078

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_4099.1_08806.t1 gi|33413776|gb|AAN39446.1| normocyte binding protein 2a [Plasmodium falciparum] 3.0e-11

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
mantle 2

Transcript
Transcript IDpfu_aug1.0_4099.1_08806.t1
Definition-
>pfu_aug1.0_4099.1_08806.t1
atggtaccaccaaatgccgtgggtgatggacactctgaaagtatagatcccaacaatccttttggattaccacaacccgc
tatggattcgcacggaatggtaccaccgaatgccgcgggggatggacacgctggaaataaccaaaacgtaaagctagaaa
ctactacatgtaaaaatgataataaagttgatcagtttcttcaaagccttatttcagatgctccggtaatcacgaataac
ggaccactgcaagacacaaagccggtgagtacttctgatgccaattatgtcgctgatatacccgctatatttcccaaaat
tgtaccgggaccggctcttggacctccgttaccgcccatgccatttgaatctacaacaacacaggctccatatgttggca
ctaatagtgcagtggacaaccaagaaggatcatctggacaccatataaatacagatttacatggtcacggtggacatcat
gcagtaaatgaccgcaaatgtgaaggggttgtaaaagacagcaccggaaaaatcactcatattgttgataagcacgattg
tagtctattgccagtaattgacagtcacgtgacgggtggtcatgtgattgatcctcacaacaacgaactccttcttgctg
tggagtcaaagagttttctccgtcctgacaacataggtagccatccccacgaagttccacaccatcctgacaatactggt
gtccatccacacgaaggtccacatcatcctggtaatactggtgtccatccacacgaaggtccacatcatcctggcaatac
tggtgtccttcccattgagggtccacaatatgctgacaatactggtgtccttccccacgaaggtccacatcatctggaca
atactggtgttcttcccaaggagggtccacaatatgctgacaatactggtgtccttcccaacgaaggtccacaccatcct
gacatcggggtacttccattggtccctgtggaaaaatcgcctttaactggaacgaaagcgaatgtccttacttccacaga
tgttcaaatgatacctgaaatgaaatatgaagcatccaaaaccgacgttaagtctggttttacggcttcggaactagagg
aacaagtacagcaggctaaaattcaggaaaagaagcagcgtttactagaacaacaggtgataaaacaggatcaagaaaag
aaaaggaaactcgcaagacataaagctcgcgaagaggaggcacgtctccgtggtgtacagcgtaaaaaagctcaagcaaa
gaaggcaaggctccttaaagaacagagaaagcaggagcaggaaaagaaaaggatacttgcgcgtcaaaaggctcgtaaag
agaaggcaagactccgagcagaacagaggaaacagaaacaagaaaaacgcagacgccttcaagaagagaaaagaagacaa
aaacaaagaagattggaagctcgagaaaaacgcagacgacaaagacaactcaggagagaagagagagcgcgaaagaaggc
agaacagcgagcaaaagcccgaaagcaaaggcaactgaaaaagaagcaagaacaaatgaaaaaaaataaaaaagaggccg
ctcttagaaaaaaggaagcagaacggaagagaaaggaggcgtcttattacaaaccggaaactaaagatgtgcaagttctc
aaatcggaagtgacgtcagatagttccagtgtacttgactttttgaaacagagacaacaatcgaagcaagaaatgttacg
acattatcagggatga

Protein
Protein IDpfu_aug1.0_4099.1_08806.t1
Definition-
>pfu_aug1.0_4099.1_08806.t1
MVPPNAVGDGHSESIDPNNPFGLPQPAMDSHGMVPPNAAGDGHAGNNQNVKLETTTCKNDNKVDQFLQSLISDAPVITNN
GPLQDTKPVSTSDANYVADIPAIFPKIVPGPALGPPLPPMPFESTTTQAPYVGTNSAVDNQEGSSGHHINTDLHGHGGHH
AVNDRKCEGVVKDSTGKITHIVDKHDCSLLPVIDSHVTGGHVIDPHNNELLLAVESKSFLRPDNIGSHPHEVPHHPDNTG
VHPHEGPHHPGNTGVHPHEGPHHPGNTGVLPIEGPQYADNTGVLPHEGPHHLDNTGVLPKEGPQYADNTGVLPNEGPHHP
DIGVLPLVPVEKSPLTGTKANVLTSTDVQMIPEMKYEASKTDVKSGFTASELEEQVQQAKIQEKKQRLLEQQVIKQDQEK
KRKLARHKAREEEARLRGVQRKKAQAKKARLLKEQRKQEQEKKRILARQKARKEKARLRAEQRKQKQEKRRRLQEEKRRQ
KQRRLEAREKRRRQRQLRREERARKKAEQRAKARKQRQLKKKQEQMKKNKKEAALRKKEAERKRKEASYYKPETKDVQVL
KSEVTSDSSSVLDFLKQRQQSKQEMLRHYQG

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