Gene
| Gene Model ID | pfu_aug1.0_41.1_50569 |
|---|---|
| Locus | scaffold41.1 : 6396 ... 25275 : - |
| To GenomeBrowser | scaffold41.1:6396..25275 |
| Genes list of scaffold | scaffold41.1 |
| Synonym | pfu_aug2.0_98.1_26845 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_41.1_50569.t1 | 1 | 1 | PB1 | 13 | 93 | 2.3e-12 | 46.3 | 8.1e-16 | 4.0e-12 | 45.6 |
| pfu_aug1.0_41.1_50569.t1 | 3 | 1 | Pkinase | 219 | 259 | 5.2e-14 | 52.0 | 6.1e-08 | 0.0003 | 20.0 |
| pfu_aug1.0_41.1_50569.t1 | 3 | 2 | Pkinase | 265 | 289 | 5.2e-14 | 52.0 | 1.7e-06 | 0.0085 | 15.2 |
| pfu_aug1.0_41.1_50569.t1 | 3 | 3 | Pkinase | 292 | 313 | 5.2e-14 | 52.0 | 3.9e-06 | 0.02 | 14.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_41.1_50569.t1 | gi|327343822|dbj|BAK09601.1| | atypical protein kinase C [Lymnaea stagnalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_41.1_50569.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_41.1_50569.t1 atgccgactcaagacagtgaagatccagagggcattaggatgaaggttctatacagtggggccatatttataacaagtat cggcttggaagtcacatatgaggatttctgtgcggagattaaagatatttgtaaatttgacgatcagcaaccgttcacga tgaaatggctggacgaagaaggagatccatgcaccatatcaacacagatagagctggatgaagctataaggttatacgaa atcaacaaagactctgagatcactgtacatgtattccctaacgtaccagagcgacctgggatgccgtgtataggagaaga cagaaatatgtacagaaaaggtgctagacgatggaggaagatctacagagttaatggacatttatttcaagccaaacgat tctctaagccaaataatcggcaagagattaaggaggatgcccagtacttgcccccaccctaccctgtcacagtgaatagc aaagatgctaacggagacacaggaacctcagtagatgtaggaatcaaggacaatattttgtatgaaaatcagtatagaca gaaattcaatatcagtatgttatacaagtacatgtataatgctgttattaagccgtctaatggtgccgactcccaccagg tgacgatggatcagtttgagttactacgagttatagggaggggaagctatgcaaaggtcctgatggtggaacaaaaacga acaaaacgagtctacgcaatgaaagttatcaaaaaggaattagtcaatgaagatgaggatgggatgagaccaggggacac aacttctacattttgcggcaccccaaattatattgccccagaaatattgcgtggaaatgactatggagacgtaacgagta cgttctgcggaactccaaactacatagccccggaaattctccgaggggaagattatgaatttaatcatgaaattgtgtat ttgctagtgaaatgtgttaaaacgtacaatacactgtcttag |
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Protein
| Protein ID | pfu_aug1.0_41.1_50569.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_41.1_50569.t1 MPTQDSEDPEGIRMKVLYSGAIFITSIGLEVTYEDFCAEIKDICKFDDQQPFTMKWLDEEGDPCTISTQIELDEAIRLYE INKDSEITVHVFPNVPERPGMPCIGEDRNMYRKGARRWRKIYRVNGHLFQAKRFSKPNNRQEIKEDAQYLPPPYPVTVNS KDANGDTGTSVDVGIKDNILYENQYRQKFNISMLYKYMYNAVIKPSNGADSHQVTMDQFELLRVIGRGSYAKVLMVEQKR TKRVYAMKVIKKELVNEDEDGMRPGDTTSTFCGTPNYIAPEILRGNDYGDVTSTFCGTPNYIAPEILRGEDYEFNHEIVY LLVKCVKTYNTLS |
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