Gene
| Gene Model ID | pfu_aug1.0_41.1_50570 |
|---|---|
| Locus | scaffold41.1 : 28606 ... 41770 : + |
| To GenomeBrowser | scaffold41.1:28606..41770 |
| Genes list of scaffold | scaffold41.1 |
| Synonym | pfu_aug2.0_98.1_26846 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_41.1_50570.t1 | 1 | 1 | F_actin_cap_B | 5 | 240 | 0.0 | 362.4 | 0.0 | 0.0 | 362.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_41.1_50570.t1 | gi|345498356|ref|XP_001607231.2| | PREDICTED: F-actin-capping protein subunit beta isoform X1 [Nasonia vitripennis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 2 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_41.1_50570.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_41.1_50570.t1 atgacagaacagcagttagattgtgccttggatcttatgaggagactgcctccccagcagatagagaaaaacctcacaga tctcatagacctggtgccatcactgtgtgaggatctgttgtcgtccgtagatcagcctctgaaaatagcccgcgacaaaa ccgtcggcaaagactacctactgtgtgattataacagagatggcgattcctacaggtcaccctggagtaattcctacgac ccccctctagatgacggaacagtcccctcagatagaatacgcaagttagaaatcgatgcgaactcagcgtttgaccagta tagggaaatgtattttgagggcggtgtctcatctgtttacctctgggatttagaccacggttttgccggctgtatcctga tcaagaaagctggggatggatccaaaaaaatcaagggatgctgggactccattcatgttattgaagttcaggagaagtcg agtggtaagggagcccattacaaattaacatctactgctatgttatggctacagacgtctaaggaggggtcaggggtcat gaacctcgggggaagtttgacacgccaggtggaaacagatgcccctgtaaacgacgcatcaccacatatagttaatatag ggaaaatggtagaggaaatggagaacaaaattaggaacacgttaaatgaaatatacttcggtaaaactagagacattgtc aatggtctccgatcattcgcgcctctcggagacaagaagcaacaagaaatgttacgcaatgatttagtggcagcactgtc caaacgaccaacggcccaatag |
|
Protein
| Protein ID | pfu_aug1.0_41.1_50570.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_41.1_50570.t1 MTEQQLDCALDLMRRLPPQQIEKNLTDLIDLVPSLCEDLLSSVDQPLKIARDKTVGKDYLLCDYNRDGDSYRSPWSNSYD PPLDDGTVPSDRIRKLEIDANSAFDQYREMYFEGGVSSVYLWDLDHGFAGCILIKKAGDGSKKIKGCWDSIHVIEVQEKS SGKGAHYKLTSTAMLWLQTSKEGSGVMNLGGSLTRQVETDAPVNDASPHIVNIGKMVEEMENKIRNTLNEIYFGKTRDIV NGLRSFAPLGDKKQQEMLRNDLVAALSKRPTAQ |
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