Gene
| Gene Model ID | pfu_aug1.0_41.1_50575 |
|---|---|
| Locus | scaffold41.1 : 80798 ... 87865 : - |
| To GenomeBrowser | scaffold41.1:80798..87865 |
| Genes list of scaffold | scaffold41.1 |
| Synonym | pfu_aug2.0_709.1_31084 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_41.1_50575.t1 | 1 | 1 | C1q | 58 | 185 | 3.4e-23 | 82.0 | 3.0e-27 | 4.4e-23 | 81.6 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantleEdge | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_41.1_50575.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_41.1_50575.t1 atgtttcgtcagtgcgctaagtttgttatcttgagcattttggtgggaaatggaatggcctgtgacgtcatgtgtgataa agatatgctgtctgcctttatacatcaaaataaagtagcaagcttttgtctagagacggtgcagaaattggctgaggaga gagtcccgatcgctttttatgcatacatgagtgttccattgaccacagcaggtcctggatctgtccttgtgtttgaggaa gtgcgtacgaacgtccacaatgcctataataatgtgacaggcgtttacacagttccaaaatctggaatgtacgtgttcac ctggacgattcgtgagcacaaatccgaacactctattgagctggtacgtaacactgaagtgctcggagctacgttcaaga gagcagaaggtagcgatgagggctcggcgagtggcactgttgtggttgaggttaacaaaggagattctgtgtttgttcgc actcattcaacatatgataagaaacagcgaatcaacaacaatttacatggtcgctcctcttttagtggatggcgtttgta a |
|
Protein
| Protein ID | pfu_aug1.0_41.1_50575.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_41.1_50575.t1 MFRQCAKFVILSILVGNGMACDVMCDKDMLSAFIHQNKVASFCLETVQKLAEERVPIAFYAYMSVPLTTAGPGSVLVFEE VRTNVHNAYNNVTGVYTVPKSGMYVFTWTIREHKSEHSIELVRNTEVLGATFKRAEGSDEGSASGTVVVEVNKGDSVFVR THSTYDKKQRINNNLHGRSSFSGWRL |
|