Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_41058.1_48436
Locus scaffold41058.1 : 1224 ... 5186 : -
To GenomeBrowser scaffold41058.1:1224..5186
Genes list of scaffold scaffold41058.1
Synonym pfu_aug2.0_2397.1_25413

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_41058.1_48436.t1 1 1 DnaJ 35 71 4.4e-09 35.9 5.1e-12 9.5e-09 34.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_41058.1_48436.t1 gi|123228202|emb|CAM26516.1| 7.0e-36

Transcript
Transcript IDpfu_aug1.0_41058.1_48436.t1
Definition-
>pfu_aug1.0_41058.1_48436.t1
gtgaaagctatcgagcatagggattctgtcctcacatcaaaacaacagatagacaagctaaatcgacctggagccacgta
cttcaatttgaatccatttgagatgtccatattagtgcatccagacaaaaatcaagatgatgttgatagggcacaaaagg
catttgaagctgtaaataaagcatataaaactctggaaaatgaagaagggatgaaaaggtgtaaagaaattattgacgag
gccagatcaagggttgatgatatgataaaacagaaaagaaagcagcttaaaaaggaaggcaaacccctagatgtcccaga
agatgagccagagaaggttcttgtacaggtcttgtag

Protein
Protein IDpfu_aug1.0_41058.1_48436.t1
Definition-
>pfu_aug1.0_41058.1_48436.t1
VKAIEHRDSVLTSKQQIDKLNRPGATYFNLNPFEMSILVHPDKNQDDVDRAQKAFEAVNKAYKTLENEEGMKRCKEIIDE
ARSRVDDMIKQKRKQLKKEGKPLDVPEDEPEKVLVQVL

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