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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_41094.1_63060
Locus scaffold41094.1 : 41 ... 3748 : +
To GenomeBrowser scaffold41094.1:41..3748
Genes list of scaffold scaffold41094.1
Synonym pfu_aug2.0_56.1_20129

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_41094.1_63060.t1 gi|291226597|ref|XP_002733282.1| 1.0e-34

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
>Adult tissues
mantleEdge 1

Transcript
Transcript IDpfu_aug1.0_41094.1_63060.t1
Definition-
>pfu_aug1.0_41094.1_63060.t1
atggtgcttatgatgtcacacatattagacattccgctacgatatcccatggtgcatcgtgtatcacgctcactcattcg
tgatcacattcacacaaaacttgctgataaagatagagaatttcctctctactcaaaaggaaaagaaagatttcagttta
actatggagtttttctgctgaataagaatatcagtcagatgagattttacttagggctggggactacagacttaaggact
actctgcagaatatcaaaactatgatggagctgcgattgggaatcaaagtagatatgccgtcagcaggaaggttgtattt
gtcaggcagtgaagggaaggagaaagtgttcagtgactttgataagacagacacccagagttctattacctccatgggta
gagtcagtctacctgatagctatgatgcacgctatatggacagtacagatgtaggagtcagaaactctggtaaatatagt
acaatggaccagacagacagattcctacaagatgtacggagggaatttgagggggaggaattgtttaatcccaccgagga
taacttcttcaaagtggcaaatccaccgtctgaaaggctggatgtgttcaataattttgatgatatgtgtgcaatagagg
acaagtgtactcacaaggataagactgtagatgtggacggctttacaaactctctacaaaggacttctagttcaaacttt
cagcatgaacaaaacggatttagcaatctaccagatgttgaatctaaagatttacaattaagtaaaggtagtactaagtc
tttggaacattctacgatgtcgggtaatagtgcaatatcaaatggtgatatagaaccctacgatttacgtggaccaagtg
tagatacaaatatgatacaaacttcacagtcccattcctga

Protein
Protein IDpfu_aug1.0_41094.1_63060.t1
Definition-
>pfu_aug1.0_41094.1_63060.t1
MVLMMSHILDIPLRYPMVHRVSRSLIRDHIHTKLADKDREFPLYSKGKERFQFNYGVFLLNKNISQMRFYLGLGTTDLRT
TLQNIKTMMELRLGIKVDMPSAGRLYLSGSEGKEKVFSDFDKTDTQSSITSMGRVSLPDSYDARYMDSTDVGVRNSGKYS
TMDQTDRFLQDVRREFEGEELFNPTEDNFFKVANPPSERLDVFNNFDDMCAIEDKCTHKDKTVDVDGFTNSLQRTSSSNF
QHEQNGFSNLPDVESKDLQLSKGSTKSLEHSTMSGNSAISNGDIEPYDLRGPSVDTNMIQTSQSHS

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