Gene
Gene Model ID | pfu_aug1.0_411.1_00292 |
---|---|
Locus | scaffold411.1 : 1502 ... 9005 : - |
To GenomeBrowser | scaffold411.1:1502..9005 |
Genes list of scaffold | scaffold411.1 |
Synonym | pfu_aug2.0_7.1_23222 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_411.1_00292.t1 | 2 | 1 | zf-B_box | 8 | 50 | 5.9e-09 | 35.6 | 6.6e-07 | 0.0024 | 17.7 |
pfu_aug1.0_411.1_00292.t1 | 2 | 2 | zf-B_box | 73 | 112 | 5.9e-09 | 35.6 | 1.0e-08 | 3.7e-05 | 23.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_411.1_00292.t1 |
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Definition | - |
>pfu_aug1.0_411.1_00292.t1 atggcgacaaattgtactgcaccatgttctctttgtgacggaaaaaatgaaataagtcggaaatgtctgaactgtgacga gtttatgtgtacggattgtagtaagatacacctcaaaagtaaaaggtctaaggaccataacgtaataacggtagaggaca cagaaaaacttactgccttggtgttatacgaacctcgagataacaaatcccatgacgaggaatgtacccggcatcgtggt gagaagtacatgttattctgtgtgaacagagagtgtgactgtttggtgtgtagttcgtgtataactgagtaccatcaggg tcataggttcgttcgtatagacgacatacttacagagtataaacgtctggacgctcagaggaacagagacgagatagagg acaatatccttccttatcttagagacaagaaagcacaggttgccaaggcgaaagaaaatgtcatctctgatatcgaaaac aaaaaagagaccataaagcaaaggtacgagcacattagaaaacaactagattcccattacaagaagacattgtcatacct cggggaaacagggaaagtcagcattgatatgcttgacgaactgaacaaagaggtagacaaacacataactcgcttacgtc acgtcgtagatacgactgatgatgtcattgatgacgaaaaccagttcaaagtaataaaacttgcacaacaacttgtagat gacatccatggtacccctgaaattcagatcccggggatcaacaggttgatgttaacccctgggcagtgttccatagagga tgtattcggggagttgcaggaagtgtatgaatgcgagccgattactatatcacgagcgtacacaggtttttctgaagtgt ctactctatgcccagtatcgccatacgaaacctggtttggacactataatcatagaggcatacgacttcttgaattggat gaatcagaacgactttatcctacggcaaattttgggcgggaaggagctttaaatttagctacatcaccggaaggagactt gtacatggtttcgtatggaagctacgacattactttgttgaaaacagacggaacaaccgccaaagtgtgtgacactagtc cactcgtagcactagggataggtatgacgaaaaaccgcgatgtactactttgtcttgcggaagcatatccgagtgaaatg aagtcagatggtgagagtaaagtggcacgattaacaaacttcggtgttcgaaaacaagaaatagaattcgacgaaattgg acgaaaaattttcgtgtatccattcagagtaggtgaaaatacgaatggagatattggggtcatagatcacgtgggggatt cagaaggaaagctcgtggtagtggattccgaaggcagagtaaaattccgttattcgggattaaacgatgatggaaacaat gactgtaatctgacagaccttgccttcgacaacgagggatgtattctgcttacggacgtgacgaaccagaccgtccatat gcttgccaaagatggcacgtttctcaggtttttagatatatttgtctggtatggttccaagctctcacccaccacactag ctctggacagtactgaatgtctgtgggtgggcggtgtgcataaacacagatattttgaccgaaatgacgcatatgtatta agagtgaaatacaaattataa |
Protein
Protein ID | pfu_aug1.0_411.1_00292.t1 |
---|---|
Definition | - |
>pfu_aug1.0_411.1_00292.t1 MATNCTAPCSLCDGKNEISRKCLNCDEFMCTDCSKIHLKSKRSKDHNVITVEDTEKLTALVLYEPRDNKSHDEECTRHRG EKYMLFCVNRECDCLVCSSCITEYHQGHRFVRIDDILTEYKRLDAQRNRDEIEDNILPYLRDKKAQVAKAKENVISDIEN KKETIKQRYEHIRKQLDSHYKKTLSYLGETGKVSIDMLDELNKEVDKHITRLRHVVDTTDDVIDDENQFKVIKLAQQLVD DIHGTPEIQIPGINRLMLTPGQCSIEDVFGELQEVYECEPITISRAYTGFSEVSTLCPVSPYETWFGHYNHRGIRLLELD ESERLYPTANFGREGALNLATSPEGDLYMVSYGSYDITLLKTDGTTAKVCDTSPLVALGIGMTKNRDVLLCLAEAYPSEM KSDGESKVARLTNFGVRKQEIEFDEIGRKIFVYPFRVGENTNGDIGVIDHVGDSEGKLVVVDSEGRVKFRYSGLNDDGNN DCNLTDLAFDNEGCILLTDVTNQTVHMLAKDGTFLRFLDIFVWYGSKLSPTTLALDSTECLWVGGVHKHRYFDRNDAYVL RVKYKL |